MGE detailed information
MGE type: Mobilizable plasmid MGE length: 105260 bp
Accession: NZ_CP103534 Location: 1..105260 Organism: Escherichia coli strain 4238 Replicon: plasmid pMB9108_1
Accession: NZ_CP103534 Location: 1..105260 Organism: Escherichia coli strain 4238 Replicon: plasmid pMB9108_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T38_RS23275 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| M5T38_RS23280 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| M5T38_RS23285 (2124) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| M5T38_RS23290 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| M5T38_RS23295 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| M5T38_RS23300 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| M5T38_RS23305 (7449) | 7449..7628 | - | 180 | Protein_6 | transposase | - |
| M5T38_RS23310 (7767) | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| M5T38_RS23315 (9128) | 9128..9396 | - | 269 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| M5T38_RS23320 (9453) | 9453..10150 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| M5T38_RS23325 (10167) | 10167..10364 | - | 198 | Protein_10 | colicin V | - |
| M5T38_RS23330 (10342) | 10342..10578 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| M5T38_RS23335 (11120) | 11120..11323 | - | 204 | Protein_12 | hypothetical protein | - |
| M5T38_RS23340 (11496) | 11496..11663 | + | 168 | Protein_13 | colicin-B | - |
| M5T38_RS23345 (11681) | 11681..12208 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| M5T38_RS23350 (12452) | 12452..13267 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| M5T38_RS23355 (13317) | 13317..13670 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| M5T38_RS23360 (13848) | 13848..14639 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| M5T38_RS23365 (14636) | 14636..15325 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| M5T38_RS23370 (15369) | 15369..15719 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| M5T38_RS23375 (16264) | 16264..17352 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| M5T38_RS23380 (17354) | 17354..19579 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| M5T38_RS23385 (19629) | 19629..20528 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| M5T38_RS23390 (20518) | 20518..20808 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| M5T38_RS23395 (21104) | 21104..21334 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| M5T38_RS23400 (21331) | 21331..21747 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| M5T38_RS23405 (21909) | 21909..24047 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| M5T38_RS23410 (24401) | 24401..24658 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| M5T38_RS23415 (24658) | 24658..25248 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| M5T38_RS23420 (25511) | 25511..26971 | + | 1461 | WP_202745975.1 | AAA family ATPase | - |
| M5T38_RS23425 (27259) | 27259..27876 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| M5T38_RS23430 (28274) | 28274..29536 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| M5T38_RS23435 (29792) | 29792..30667 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| M5T38_RS23440 (30714) | 30714..31007 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| M5T38_RS23445 (31224) | 31224..32303 | - | 1080 | WP_001089727.1 | permease | - |
| M5T38_RS23450 (32408) | 32408..32731 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| M5T38_RS23455 (32892) | 32892..33212 | + | 321 | Protein_36 | NAD(P)H-dependent oxidoreductase | - |
| M5T38_RS23460 (33265) | 33265..33969 | - | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| M5T38_RS23465 (34035) | 34035..35378 | + | 1344 | Protein_38 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| M5T38_RS23470 (35429) | 35429..36133 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23475 (36199) | 36199..36483 | + | 285 | Protein_40 | IS6 family transposase IS26 | Transposase |
| M5T38_RS23480 (36673) | 36673..37488 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| M5T38_RS23485 (37639) | 37639..38343 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23490 (38487) | 38487..39128 | - | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| M5T38_RS23495 (39278) | 39278..39778 | - | 501 | WP_001239317.1 | hypothetical protein | - |
| M5T38_RS23500 (39858) | 39858..40562 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23505 (41010) | 41010..42023 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| M5T38_RS23510 (42179) | 42179..42652 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| M5T38_RS23515 (42722) | 42722..43426 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23520 (43479) | 43479..44276 | - | 798 | Protein_49 | IS91 family transposase ISAzo26 | Transposase |
| M5T38_RS23525 (44425) | 44425..45263 | + | 839 | Protein_50 | Streptomycin 3''-adenylyltransferase | ARG |
| M5T38_RS23530 (45348) | 45348..46169 | + | 822 | WP_000939727.1 | hypothetical protein | ARG |
| M5T38_RS23535 (46322) | 46322..47026 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23540 (47081) | 47081..47338 | + | 258 | Protein_53 | hypothetical protein | - |
| M5T38_RS23545 (47484) | 47484..48347 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| M5T38_RS23550 (48385) | 48385..48630 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| M5T38_RS23555 (49099) | 49099..49890 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| M5T38_RS23560 (49893) | 49893..50168 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| M5T38_RS23565 (50191) | 50191..50823 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| M5T38_RS23570 (51070) | 51070..51402 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| M5T38_RS23575 (51525) | 51525..52363 | - | 839 | Protein_60 | Streptomycin 3''-adenylyltransferase | ARG |
| M5T38_RS23580 (52452) | 52452..53342 | - | 891 | WP_223151485.1 | alpha/beta fold putative hydrolase EstX | - |
| M5T38_RS23585 (53759) | 53759..54265 | - | 507 | Protein_62 | transposase | - |
| M5T38_RS23590 (54330) | 54330..55034 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23595 (55081) | 55081..57381 | + | 2301 | Protein_64 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M5T38_RS23600 (57458) | 57458..58162 | + | 705 | WP_001067834.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23605 (58216) | 58216..59264 | - | 1049 | Protein_66 | IS3 family transposase ISKpn11 | Transposase |
| M5T38_RS23610 (59356) | 59356..59898 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| M5T38_RS23615 (59911) | 59911..60771 | - | 861 | WP_000557452.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| M5T38_RS23620 (60878) | 60878..61582 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M5T38_RS23625 (61648) | 61648..62193 | + | 546 | Protein_70 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M5T38_RS23630 (62229) | 62229..62644 | - | 416 | Protein_71 | IS1 family transposase | - |
| M5T38_RS23635 (62893) | 62893..63294 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| M5T38_RS23640 (63227) | 63227..63484 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| M5T38_RS23645 (63577) | 63577..64230 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| M5T38_RS23650 (65169) | 65169..66026 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| M5T38_RS23655 (66019) | 66019..66501 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| M5T38_RS23660 (66494) | 66494..66541 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| M5T38_RS23665 (66532) | 66532..66783 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| M5T38_RS23670 (66800) | 66800..67057 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| M5T38_RS23675 (67341) | 67341..67490 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (67534) | 67534..67595 | + | 62 | NuclAT_1 | - | - |
| - (67534) | 67534..67595 | + | 62 | NuclAT_1 | - | - |
| - (67534) | 67534..67595 | + | 62 | NuclAT_1 | - | - |
| - (67534) | 67534..67595 | + | 62 | NuclAT_1 | - | - |
| M5T38_RS23680 (67851) | 67851..67925 | - | 75 | Protein_81 | endonuclease | - |
| M5T38_RS23685 (68171) | 68171..68383 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| M5T38_RS23690 (68519) | 68519..69079 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| M5T38_RS23695 (69182) | 69182..70042 | - | 861 | WP_000704513.1 | Quorum-quenching protein AidA | VF |
| M5T38_RS23700 (70101) | 70101..70847 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| M5T38_RS23705 (70867) | 70867..72480 | - | 1614 | Protein_86 | Multifunctional conjugation protein TraI | Relaxase |
| M5T38_RS23710 (72468) | 72468..72680 | - | 213 | Protein_87 | conjugal transfer protein TraB | - |
| M5T38_RS23715 (72680) | 72680..73408 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| M5T38_RS23720 (73395) | 73395..73961 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| M5T38_RS23725 (73983) | 73983..74294 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| M5T38_RS23730 (74309) | 74309..74674 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| M5T38_RS23735 (74707) | 74707..75108 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| M5T38_RS23740 (75201) | 75201..75890 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| M5T38_RS23745 (76077) | 76077..76460 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| M5T38_RS23750 (76781) | 76781..77383 | + | 603 | WP_072156291.1 | hypothetical protein | VF |
| M5T38_RS23755 (77680) | 77680..78501 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| M5T38_RS23760 (78620) | 78620..78907 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| M5T38_RS23765 (78932) | 78932..79138 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| M5T38_RS23770 (79208) | 79208..79381 | + | 174 | Protein_99 | hypothetical protein | - |
| M5T38_RS23775 (79379) | 79379..79609 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| M5T38_RS23780 (79829) | 79829..79954 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| M5T38_RS23785 (79896) | 79896..80045 | - | 150 | Protein_102 | plasmid maintenance protein Mok | - |
| - (80031) | 80031..80255 | - | 225 | NuclAT_0 | - | - |
| - (80031) | 80031..80255 | - | 225 | NuclAT_0 | - | - |
| - (80031) | 80031..80255 | - | 225 | NuclAT_0 | - | - |
| - (80031) | 80031..80255 | - | 225 | NuclAT_0 | - | - |
| M5T38_RS23790 (80067) | 80067..80255 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| M5T38_RS23795 (80224) | 80224..80986 | - | 763 | Protein_104 | plasmid SOS inhibition protein A | - |
| M5T38_RS23800 (80983) | 80983..81417 | - | 435 | WP_064770609.1 | conjugation system SOS inhibitor PsiB | - |
| M5T38_RS23805 (81472) | 81472..81669 | - | 198 | Protein_106 | hypothetical protein | - |
| M5T38_RS23810 (81697) | 81697..81930 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| M5T38_RS23815 (81998) | 81998..82537 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| M5T38_RS23820 (82563) | 82563..82769 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| M5T38_RS23825 (82839) | 82839..82919 | + | 81 | Protein_110 | hypothetical protein | - |
| M5T38_RS23830 (83102) | 83102..83271 | - | 170 | Protein_111 | hypothetical protein | - |
| M5T38_RS23835 (83908) | 83908..84879 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M5T38_RS23840 (84879) | 84879..86045 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| M5T38_RS23850 (87527) | 87527..89728 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| M5T38_RS23855 (89754) | 89754..91087 | - | 1334 | Protein_116 | L-lysine N6-monooxygenase | VF |
| M5T38_RS23860 (91084) | 91084..92826 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| M5T38_RS23865 (92826) | 92826..93773 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| M5T38_RS23870 (93774) | 93774..95498 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| M5T38_RS23875 (95634) | 95634..96827 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| M5T38_RS23880 (97207) | 97207..97587 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| M5T38_RS23885 (97928) | 97928..98341 | - | 414 | Protein_122 | phosphopyruvate hydratase | - |
| M5T38_RS23890 (98339) | 98339..98596 | + | 258 | Protein_123 | transposase | - |
| M5T38_RS23895 (98830) | 98830..99687 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| M5T38_RS23900 (99684) | 99684..100541 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| M5T38_RS23905 (100538) | 100538..101365 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| M5T38_RS23910 (101365) | 101365..102279 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| M5T38_RS23915 (102635) | 102635..103332 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| M5T38_RS23920 (103512) | 103512..104025 | - | 514 | Protein_129 | DUF4113 domain-containing protein | - |
| M5T38_RS23925 (104086) | 104086..104190 | - | 105 | Protein_130 | AAA family ATPase | - |
| M5T38_RS23930 (104192) | 104192..104515 | - | 324 | Protein_131 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|