MGE detailed information
MGE type: Conjugative plasmid MGE length: 87513 bp
Accession: NZ_CP103505 Location: 1..87513 Organism: Klebsiella pneumoniae strain 5547 Replicon: plasmid pMB9481_2
Accession: NZ_CP103505 Location: 1..87513 Organism: Klebsiella pneumoniae strain 5547 Replicon: plasmid pMB9481_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5R16_RS27410 (1) | 1..438 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M5R16_RS27415 (438) | 438..1709 | + | 1272 | WP_105910596.1 | Y-family DNA polymerase | - |
| M5R16_RS27420 (1714) | 1714..2106 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| M5R16_RS27425 (2111) | 2111..3082 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| M5R16_RS27430 (3311) | 3311..3955 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| M5R16_RS27435 (3949) | 3949..4224 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| M5R16_RS27440 (4362) | 4362..5141 | - | 780 | WP_032165942.1 | site-specific integrase | - |
| M5R16_RS27445 (5192) | 5192..5962 | - | 771 | WP_001499400.1 | hypothetical protein | - |
| M5R16_RS27450 (6024) | 6024..6338 | - | 315 | WP_001302628.1 | hypothetical protein | - |
| M5R16_RS27455 (6908) | 6908..7165 | + | 258 | WP_094308825.1 | hypothetical protein | - |
| M5R16_RS27460 (7165) | 7165..7755 | + | 591 | WP_102000831.1 | hypothetical protein | - |
| M5R16_RS27465 (7967) | 7967..9019 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| M5R16_RS27470 (9195) | 9195..9797 | + | 603 | WP_094308828.1 | ProQ/FINO family protein | - |
| M5R16_RS27475 (9853) | 9853..10092 | + | 240 | Protein_14 | hypothetical protein | - |
| M5R16_RS27480 (10347) | 10347..10622 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5R16_RS27485 (10622) | 10622..10906 | - | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M5R16_RS27490 (11811) | 11811..12842 | - | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| M5R16_RS27495 (13798) | 13798..14076 | + | 279 | WP_219065241.1 | ash family protein | - |
| M5R16_RS27500 (13994) | 13994..14281 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M5R16_RS27505 (14723) | 14723..15256 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| M5R16_RS27510 (15509) | 15509..16192 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| M5R16_RS27515 (16364) | 16364..16618 | + | 255 | WP_074182765.1 | PilI type IV pilus biogenesis protein | - |
| M5R16_RS27520 (16661) | 16661..16948 | + | 288 | WP_074182766.1 | pilJ | - |
| M5R16_RS27525 (17569) | 17569..18636 | + | 1068 | WP_074182768.1 | hypothetical protein | VF |
| M5R16_RS27530 (18636) | 18636..19073 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| M5R16_RS27535 (19087) | 19087..20769 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| M5R16_RS27540 (20762) | 20762..22057 | + | 1296 | WP_064148456.1 | type 4b pilus protein PilO2 | - |
| M5R16_RS27545 (22044) | 22044..22496 | + | 453 | WP_074182770.1 | hypothetical protein | VF |
| M5R16_RS27550 (22507) | 22507..24060 | + | 1554 | WP_042012074.1 | hypothetical protein | VF |
| M5R16_RS27555 (24073) | 24073..25158 | + | 1086 | WP_063103211.1 | hypothetical protein | VF |
| M5R16_RS27560 (25175) | 25175..25789 | + | 615 | WP_064148457.1 | hypothetical protein | VF |
| M5R16_RS27565 (25799) | 25799..26359 | + | 561 | WP_063124165.1 | hypothetical protein | VF |
| M5R16_RS27570 (26344) | 26344..27000 | + | 657 | WP_074182772.1 | hypothetical protein | VF |
| M5R16_RS27575 (27000) | 27000..28091 | + | 1092 | Protein_34 | hypothetical protein | VF |
| M5R16_RS27580 (28945) | 28945..30099 | + | 1155 | WP_064148474.1 | site-specific integrase | - |
| M5R16_RS27585 (30250) | 30250..31074 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| M5R16_RS27590 (31160) | 31160..32362 | + | 1203 | WP_064148458.1 | conjugal transfer protein TraF | - |
| M5R16_RS27595 (32422) | 32422..33006 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| M5R16_RS27600 (33401) | 33401..33859 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| M5R16_RS27605 (33856) | 33856..34674 | + | 819 | WP_064148460.1 | hypothetical protein | VF |
| M5R16_RS27610 (34671) | 34671..35819 | + | 1149 | WP_001024975.1 | putative protein YggR | VF |
| M5R16_RS27615 (35816) | 35816..36106 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| M5R16_RS27620 (36121) | 36121..36672 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| M5R16_RS27625 (36762) | 36762..40529 | + | 3768 | WP_064148461.1 | DUF5710 domain-containing protein | - |
| M5R16_RS27630 (40547) | 40547..40894 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M5R16_RS27635 (40891) | 40891..41583 | + | 693 | WP_064148462.1 | DotI/IcmL family type IV secretion protein | - |
| M5R16_RS27640 (41594) | 41594..42577 | + | 984 | WP_064148463.1 | hypothetical protein | VF |
| M5R16_RS27645 (42580) | 42580..43869 | + | 1290 | WP_064148464.1 | conjugal transfer protein TraO | - |
| M5R16_RS27650 (43869) | 43869..44573 | + | 705 | WP_042012199.1 | IncI1-type conjugal transfer protein TraP | - |
| M5R16_RS27655 (44573) | 44573..45100 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M5R16_RS27660 (45151) | 45151..45555 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| M5R16_RS27665 (45619) | 45619..45807 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M5R16_RS27670 (45791) | 45791..46591 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M5R16_RS27675 (46681) | 46681..49725 | + | 3045 | WP_064148465.1 | IncI1-type conjugal transfer protein TraU | - |
| M5R16_RS27680 (49725) | 49725..50339 | + | 615 | WP_001542516.1 | IncI1-type conjugal transfer protein TraV | - |
| M5R16_RS27685 (50306) | 50306..51508 | + | 1203 | WP_064148466.1 | IncI1-type conjugal transfer protein TraW | - |
| M5R16_RS27690 (51537) | 51537..51701 | + | 165 | Protein_57 | conjugal transfer protein TraX | - |
| M5R16_RS27695 (51721) | 51721..53334 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| M5R16_RS27700 (53365) | 53365..53715 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| M5R16_RS27705 (53712) | 53712..54137 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| M5R16_RS27710 (54224) | 54224..54661 | + | 438 | Protein_61 | conjugal transfer protein TraX | - |
| M5R16_RS27715 (54758) | 54758..56926 | + | 2169 | WP_064148468.1 | DotA/TraY family protein | - |
| M5R16_RS27720 (56997) | 56997..57659 | + | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5R16_RS27725 (57731) | 57731..57940 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| M5R16_RS27730 (58333) | 58333..58509 | + | 177 | WP_180335155.1 | hypothetical protein | - |
| - (59398) | 59398..59449 | + | 52 | NuclAT_1 | - | - |
| - (59398) | 59398..59449 | + | 52 | NuclAT_1 | - | - |
| - (59398) | 59398..59449 | + | 52 | NuclAT_1 | - | - |
| - (59398) | 59398..59449 | + | 52 | NuclAT_1 | - | - |
| M5R16_RS27735 (60165) | 60165..60317 | - | 153 | WP_024179505.1 | Hok/Gef family protein | Toxin Detail |
| - (60369) | 60369..60429 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60369) | 60369..60429 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60369) | 60369..60429 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60369) | 60369..60429 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| M5R16_RS27740 (60609) | 60609..61817 | + | 1209 | WP_064148469.1 | IncI1-type conjugal transfer protein TrbA | - |
| M5R16_RS27745 (61836) | 61836..62906 | + | 1071 | WP_064148470.1 | IncI1-type conjugal transfer protein TrbB | - |
| M5R16_RS27750 (62899) | 62899..65190 | + | 2292 | WP_077265944.1 | F-type conjugative transfer protein TrbC | - |
| M5R16_RS27755 (65227) | 65227..67926 | - | 2700 | WP_117064813.1 | hypothetical protein | Relaxase |
| M5R16_RS27760 (67937) | 67937..68269 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| M5R16_RS27765 (68503) | 68503..68838 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M5R16_RS27770 (68924) | 68924..69772 | - | 849 | WP_117064812.1 | DUF4942 domain-containing protein | - |
| M5R16_RS27775 (70351) | 70351..70602 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| M5R16_RS27780 (70633) | 70633..70878 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| M5R16_RS27785 (70878) | 70878..71792 | - | 915 | WP_117064811.1 | ISNCY family transposase ISRor2 | VF |
| M5R16_RS27790 (71857) | 71857..72123 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| M5R16_RS27795 (72208) | 72208..73212 | + | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| M5R16_RS27800 (73539) | 73539..73973 | - | 435 | WP_259423660.1 | post-segregation killing protein PndC | - |
| M5R16_RS27805 (74212) | 74212..74916 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M5R16_RS27810 (75530) | 75530..76030 | - | 501 | WP_077900469.1 | antirestriction protein ArdA | - |
| M5R16_RS27815 (76492) | 76492..77088 | - | 597 | WP_172692548.1 | hypothetical protein | - |
| M5R16_RS27820 (77085) | 77085..77804 | - | 720 | WP_001276262.1 | plasmid SOS inhibition protein A | - |
| M5R16_RS27825 (77801) | 77801..78235 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| M5R16_RS27830 (78290) | 78290..80248 | - | 1959 | WP_094308811.1 | ParB/RepB/Spo0J family partition protein | - |
| M5R16_RS27835 (80310) | 80310..80543 | - | 234 | WP_024261882.1 | DUF905 domain-containing protein | - |
| M5R16_RS27840 (80600) | 80600..81127 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| M5R16_RS27845 (81896) | 81896..82087 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| M5R16_RS27850 (82084) | 82084..82506 | - | 423 | WP_117064820.1 | DUF1380 family protein | - |
| M5R16_RS27855 (82553) | 82553..82978 | - | 426 | WP_142777227.1 | antirestriction protein | - |
| M5R16_RS27860 (83389) | 83389..84165 | - | 777 | WP_259423675.1 | hypothetical protein | - |
| M5R16_RS27865 (84211) | 84211..84678 | - | 468 | WP_227661723.1 | DUF1380 family protein | - |
| M5R16_RS27870 (84659) | 84659..84880 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| M5R16_RS27875 (84881) | 84881..85564 | - | 684 | WP_259423679.1 | DNA methylase | - |
| M5R16_RS27880 (85641) | 85641..85952 | - | 312 | WP_032317461.1 | hypothetical protein | - |
| M5R16_RS27885 (85949) | 85949..86851 | - | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|