MGE detailed information
MGE type: Conjugative plasmid MGE length: 85055 bp
Accession: NZ_CP103470 Location: 1..85055 Organism: Escherichia coli strain 4973 Replicon: plasmid pMB9698_2
Accession: NZ_CP103470 Location: 1..85055 Organism: Escherichia coli strain 4973 Replicon: plasmid pMB9698_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S50_RS25625 (46) | 46..1077 | + | 1032 | WP_000907869.1 | plasmid replication initiator RepA | - |
| M5S50_RS25630 (1982) | 1982..2266 | + | 285 | WP_053264324.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M5S50_RS25635 (2266) | 2266..2541 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5S50_RS25640 (2647) | 2647..2850 | + | 204 | Protein_3 | hypothetical protein | - |
| M5S50_RS25645 (3120) | 3120..3386 | - | 267 | WP_021513970.1 | hypothetical protein | - |
| M5S50_RS25650 (3386) | 3386..3880 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| M5S50_RS25655 (3936) | 3936..4538 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| M5S50_RS25660 (4714) | 4714..5766 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| M5S50_RS25665 (5979) | 5979..6569 | - | 591 | WP_259423644.1 | hypothetical protein | - |
| M5S50_RS25670 (6569) | 6569..6823 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| M5S50_RS25675 (7392) | 7392..7805 | + | 414 | WP_021513973.1 | hypothetical protein | - |
| M5S50_RS25680 (7807) | 7807..8586 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| M5S50_RS25685 (8766) | 8766..9410 | + | 645 | WP_001144036.1 | ParA family protein | - |
| M5S50_RS25690 (9497) | 9497..9805 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| M5S50_RS25695 (10219) | 10219..11199 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| M5S50_RS25700 (11192) | 11192..11608 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M5S50_RS25705 (11610) | 11610..12884 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| M5S50_RS25710 (12884) | 12884..13321 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M5S50_RS25715 (13318) | 13318..13566 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| M5S50_RS25720 (13984) | 13984..14886 | + | 903 | WP_072748703.1 | DUF1281 domain-containing protein | - |
| M5S50_RS25725 (14890) | 14890..15195 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| M5S50_RS25730 (15271) | 15271..15954 | + | 684 | WP_000086160.1 | DNA methylase | - |
| M5S50_RS25735 (15955) | 15955..16176 | + | 222 | WP_021560304.1 | hypothetical protein | - |
| M5S50_RS25740 (16070) | 16070..16623 | + | 554 | Protein_23 | DUF1380 domain-containing protein | - |
| M5S50_RS25745 (16669) | 16669..17445 | + | 777 | WP_061671617.1 | hypothetical protein | - |
| M5S50_RS25750 (17858) | 17858..18283 | + | 426 | WP_001376246.1 | antirestriction protein | - |
| M5S50_RS25755 (18330) | 18330..18752 | + | 423 | WP_259423645.1 | DUF1380 domain-containing protein | - |
| M5S50_RS25760 (18749) | 18749..18940 | + | 192 | WP_001697954.1 | hypothetical protein | - |
| M5S50_RS25765 (19011) | 19011..19325 | + | 315 | WP_024199621.1 | hypothetical protein | - |
| M5S50_RS25770 (19709) | 19709..20236 | + | 528 | WP_053264372.1 | single-stranded DNA-binding protein | - |
| M5S50_RS25775 (20293) | 20293..20526 | + | 234 | WP_061671613.1 | DUF905 domain-containing protein | - |
| M5S50_RS25780 (20588) | 20588..22546 | + | 1959 | WP_061671612.1 | ParB/RepB/Spo0J family partition protein | - |
| M5S50_RS25785 (22601) | 22601..23035 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| M5S50_RS25790 (23032) | 23032..23751 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| M5S50_RS25795 (23881) | 23881..25056 | + | 1176 | WP_061671611.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| M5S50_RS25800 (25504) | 25504..26004 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| M5S50_RS25805 (26733) | 26733..27167 | + | 435 | WP_259423646.1 | post-segregation killing protein PndC | - |
| M5S50_RS25810 (27260) | 27260..27526 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| M5S50_RS25815 (27591) | 27591..28481 | + | 891 | WP_000038399.1 | ISNCY family transposase ISSen7 | VF |
| M5S50_RS25820 (28481) | 28481..28738 | + | 258 | WP_165715391.1 | hypothetical protein | VF |
| M5S50_RS25825 (28769) | 28769..29020 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| M5S50_RS25830 (29601) | 29601..30449 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| M5S50_RS25835 (30535) | 30535..30870 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M5S50_RS25840 (31104) | 31104..31436 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| M5S50_RS25845 (31447) | 31447..34146 | + | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| M5S50_RS25850 (34183) | 34183..36474 | - | 2292 | WP_112893574.1 | F-type conjugative transfer protein TrbC | - |
| M5S50_RS25855 (36467) | 36467..37537 | - | 1071 | WP_000151579.1 | IncI1-type conjugal transfer protein TrbB | - |
| M5S50_RS25860 (37556) | 37556..38764 | - | 1209 | WP_259423648.1 | IncI1-type conjugal transfer protein TrbA | - |
| M5S50_RS25865 (38982) | 38982..39935 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (40129) | 40129..40186 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40129) | 40129..40186 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40129) | 40129..40186 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40129) | 40129..40186 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| M5S50_RS25870 (40241) | 40241..40393 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| M5S50_RS25875 (40821) | 40821..41053 | + | 233 | Protein_50 | hypothetical protein | - |
| M5S50_RS25880 (41118) | 41118..41294 | - | 177 | WP_001054901.1 | hypothetical protein | - |
| M5S50_RS25885 (41626) | 41626..41835 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| M5S50_RS25890 (41907) | 41907..42569 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5S50_RS25895 (42640) | 42640..44808 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| M5S50_RS25900 (44905) | 44905..45489 | - | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| M5S50_RS25905 (45518) | 45518..46720 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| M5S50_RS25910 (46687) | 46687..47301 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| M5S50_RS25915 (47301) | 47301..50345 | - | 3045 | WP_071447696.1 | IncI1-type conjugal transfer protein TraU | - |
| M5S50_RS25920 (50435) | 50435..51235 | - | 801 | WP_060527642.1 | IncI1-type conjugal transfer protein TraT | - |
| M5S50_RS25925 (51219) | 51219..51407 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M5S50_RS25930 (51471) | 51471..51875 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| M5S50_RS25935 (51926) | 51926..52453 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M5S50_RS25940 (52453) | 52453..53157 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| M5S50_RS25945 (53157) | 53157..54446 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| M5S50_RS25950 (54449) | 54449..55432 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| M5S50_RS25955 (55443) | 55443..56135 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| M5S50_RS25960 (56132) | 56132..56479 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M5S50_RS25965 (56497) | 56497..60264 | - | 3768 | WP_021513964.1 | DUF5710 domain-containing protein | - |
| M5S50_RS25970 (60354) | 60354..60905 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| M5S50_RS25975 (60920) | 60920..61210 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| M5S50_RS25980 (61207) | 61207..62355 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| M5S50_RS25985 (62352) | 62352..63170 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| M5S50_RS25990 (63167) | 63167..63625 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| M5S50_RS25995 (64020) | 64020..64604 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| M5S50_RS26000 (64664) | 64664..65866 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| M5S50_RS26005 (65952) | 65952..66776 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| M5S50_RS26010 (66927) | 66927..68081 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| M5S50_RS26015 (69601) | 69601..69849 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| M5S50_RS26020 (69846) | 69846..71138 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| M5S50_RS26025 (71138) | 71138..71794 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| M5S50_RS26030 (71779) | 71779..72339 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| M5S50_RS26035 (72349) | 72349..72963 | - | 615 | WP_052980409.1 | hypothetical protein | VF |
| M5S50_RS26040 (72980) | 72980..74065 | - | 1086 | WP_112893617.1 | hypothetical protein | VF |
| M5S50_RS26045 (74078) | 74078..75631 | - | 1554 | WP_000362204.1 | hypothetical protein | VF |
| M5S50_RS26050 (75642) | 75642..76094 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| M5S50_RS26055 (76081) | 76081..77376 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| M5S50_RS26060 (77369) | 77369..79051 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| M5S50_RS26065 (79065) | 79065..79502 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| M5S50_RS26070 (79502) | 79502..80569 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| M5S50_RS26075 (81321) | 81321..81575 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| M5S50_RS26080 (81747) | 81747..82430 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| M5S50_RS26085 (82684) | 82684..83217 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| M5S50_RS26090 (83659) | 83659..83946 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| M5S50_RS26095 (83984) | 83984..84142 | - | 159 | Protein_94 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|