MGE detailed information
MGE type: Genomic_island MGE length: 68127 bp
Accession: NZ_CP103465 Location: 785830..853956 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Accession: NZ_CP103465 Location: 785830..853956 Organism: Escherichia coli O25b:H4-ST131 strain 5392 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T42_RS03810 (781110) | 781110..781481 | + | 372 | WP_000820073.1 | type II secretion system minor pseudopilin GspI | - |
| M5T42_RS03815 (781478) | 781478..782083 | + | 606 | WP_060624723.1 | type II secretion system minor pseudopilin GspJ | - |
| M5T42_RS03820 (782083) | 782083..783060 | + | 978 | WP_001357646.1 | type II secretion system minor pseudopilin GspK | - |
| M5T42_RS03825 (783057) | 783057..784235 | + | 1179 | WP_060624722.1 | type II secretion system protein GspL | - |
| M5T42_RS03830 (784237) | 784237..784773 | + | 537 | WP_021522237.1 | GspM family type II secretion system protein YghD | - |
| M5T42_RS03835 (785830) | 785830..786606 | + | 777 | WP_049144537.1 | Polysialic acid transport protein KpsM | VF |
| M5T42_RS03840 (786603) | 786603..787274 | + | 672 | WP_049144536.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| M5T42_RS03845 (787285) | 787285..789531 | + | 2247 | WP_049144535.1 | glycosyltransferase | - |
| M5T42_RS03850 (789531) | 789531..790286 | + | 756 | WP_049144534.1 | hypothetical protein | - |
| M5T42_RS03855 (790295) | 790295..791308 | + | 1014 | WP_000115194.1 | UDP-glucose 4-epimerase | VF |
| M5T42_RS03860 (791461) | 791461..792494 | + | 1034 | Protein_758 | IS481 family transposase | - |
| M5T42_RS03865 (792545) | 792545..793771 | - | 1227 | WP_049144533.1 | hypothetical protein | VF |
| M5T42_RS03870 (793806) | 793806..795833 | - | 2028 | WP_049144532.1 | hypothetical protein | VF |
| M5T42_RS03875 (795830) | 795830..796570 | - | 741 | WP_049144531.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| M5T42_RS03880 (796580) | 796580..798256 | - | 1677 | WP_001606112.1 | Polysialic acid transport protein KpsD | VF |
| M5T42_RS03885 (798280) | 798280..799428 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| M5T42_RS03890 (799500) | 799500..800483 | - | 984 | WP_001298261.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| M5T42_RS03895 (801290) | 801290..801460 | - | 171 | Protein_765 | IS110 family transposase ISEc32 | Transposase |
| M5T42_RS03900 (801931) | 801931..802824 | - | 894 | WP_001114681.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| M5T42_RS03905 (802817) | 802817..803212 | - | 396 | WP_000208383.1 | DUF6088 family protein | Antitoxin Detail |
| M5T42_RS03910 (803281) | 803281..804126 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| M5T42_RS03915 (804211) | 804211..804408 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| M5T42_RS03920 (804425) | 804425..804913 | - | 489 | WP_000761699.1 | DUF5983 family protein | - |
| M5T42_RS03925 (804910) | 804910..805287 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5T42_RS03930 (805376) | 805376..805744 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5T42_RS03935 (805794) | 805794..806438 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| M5T42_RS03940 (806457) | 806457..806678 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| M5T42_RS03945 (806741) | 806741..807217 | - | 477 | WP_001186726.1 | RadC family protein | - |
| M5T42_RS03950 (807233) | 807233..807718 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| M5T42_RS03955 (807773) | 807773..808591 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| M5T42_RS03960 (808692) | 808692..808925 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| M5T42_RS03965 (809004) | 809004..809459 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| M5T42_RS03970 (809535) | 809535..810662 | - | 1128 | Protein_780 | hypothetical protein | - |
| M5T42_RS03975 (810757) | 810757..813879 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| M5T42_RS03980 (814213) | 814213..815085 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| M5T42_RS03985 (816417) | 816417..817907 | + | 1491 | WP_001305029.1 | YfjI family protein | - |
| M5T42_RS03990 (818028) | 818028..818600 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| M5T42_RS03995 (818686) | 818686..818892 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| M5T42_RS04000 (819810) | 819810..819989 | + | 180 | Protein_786 | hemolysin expression modulator Hha | - |
| M5T42_RS04005 (820322) | 820322..820519 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| M5T42_RS04010 (820718) | 820718..821287 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| M5T42_RS04015 (821454) | 821454..821837 | + | 384 | WP_000271011.1 | putative zinc ribbon protein | - |
| M5T42_RS04020 (821834) | 821834..821974 | + | 141 | Protein_790 | hypothetical protein | - |
| M5T42_RS04025 (822006) | 822006..823619 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| M5T42_RS04030 (823650) | 823650..824000 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| M5T42_RS04035 (823997) | 823997..824422 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| M5T42_RS04040 (824598) | 824598..826136 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| M5T42_RS04045 (826136) | 826136..827233 | - | 1098 | Protein_795 | IS66 family transposase IS682 | Transposase |
| M5T42_RS04050 (827264) | 827264..827614 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| M5T42_RS04055 (827611) | 827611..828036 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| M5T42_RS04060 (828182) | 828182..828579 | - | 398 | Protein_798 | transposase domain-containing protein | - |
| M5T42_RS04065 (828697) | 828697..829614 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| M5T42_RS04070 (829648) | 829648..830523 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| M5T42_RS04075 (830572) | 830572..832044 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| M5T42_RS04080 (832048) | 832048..832878 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| M5T42_RS04085 (832924) | 832924..833634 | + | 711 | WP_001296386.1 | oligogalacturonate-specific porin KdgM family protein | - |
| M5T42_RS04090 (833647) | 833647..834756 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| M5T42_RS04095 (834818) | 834818..835741 | + | 924 | WP_001030790.1 | alpha/beta hydrolase | - |
| M5T42_RS04100 (835777) | 835777..836511 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| M5T42_RS04105 (836608) | 836608..837597 | + | 990 | WP_000990138.1 | sialate O-acetylesterase | - |
| M5T42_RS04110 (837749) | 837749..838977 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| M5T42_RS04115 (839477) | 839477..841567 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| M5T42_RS04120 (841785) | 841785..841865 | - | 81 | WP_071533291.1 | hypothetical protein | - |
| M5T42_RS04125 (841828) | 841828..842025 | + | 198 | WP_001296384.1 | hypothetical protein | - |
| M5T42_RS04130 (842429) | 842429..842671 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| M5T42_RS04135 (842759) | 842759..842950 | + | 192 | WP_001322947.1 | hypothetical protein | - |
| M5T42_RS04140 (842962) | 842962..843321 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| M5T42_RS04145 (843325) | 843325..843540 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| M5T42_RS04150 (844118) | 844118..844440 | - | 323 | Protein_816 | transposase | - |
| M5T42_RS04155 (844460) | 844460..844969 | + | 510 | Protein_817 | L-lactate permease | - |
| M5T42_RS04160 (845003) | 845003..846535 | - | 1533 | Protein_818 | IS3 family transposase | - |
| M5T42_RS04165 (846951) | 846951..847406 | - | 456 | WP_000261589.1 | hypothetical protein | - |
| M5T42_RS04170 (847418) | 847418..848308 | - | 891 | Protein_820 | IS3 family transposase ISSd1 | Transposase |
| M5T42_RS04175 (848321) | 848321..849472 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| M5T42_RS04180 (849469) | 849469..849555 | - | 87 | Protein_822 | IS3 family transposase ISSfl10 | Transposase |
| M5T42_RS04185 (849537) | 849537..849797 | - | 261 | Protein_823 | IS3 family transposase ISSfl10 | Transposase |
| M5T42_RS04190 (850069) | 850069..853956 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| M5T42_RS04195 (854206) | 854206..854349 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| M5T42_RS04200 (854900) | 854900..857101 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| M5T42_RS04205 (857127) | 857127..858460 | - | 1334 | Protein_827 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|