MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81805 bp
Accession: NZ_CP103422 Location: 1..81805 Organism: Klebsiella variicola strain KV1 Replicon: plasmid unnamed2
Accession: NZ_CP103422 Location: 1..81805 Organism: Klebsiella variicola strain KV1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYO12_RS29760 (NYO12_29760) | 1..1014 | + | 1014 | WP_259075185.1 | plasmid replication initiator RepA | - |
| NYO12_RS29765 (NYO12_29765) | 1883..2602 | - | 720 | WP_259075136.1 | FadR/GntR family transcriptional regulator | - |
| NYO12_RS29770 (NYO12_29770) | 2693..3784 | - | 1092 | WP_259075139.1 | L-idonate 5-dehydrogenase | - |
| NYO12_RS29775 (NYO12_29775) | 3753..5114 | - | 1362 | WP_259075140.1 | D-galactonate transporter | VF |
| NYO12_RS29780 (NYO12_29780) | 5198..5965 | - | 768 | WP_259075143.1 | 5-keto-D-gluconate 5-reductase | VF |
| NYO12_RS29785 (NYO12_29785) | 6303..7556 | + | 1254 | WP_259075145.1 | enolase C-terminal domain-like protein | - |
| NYO12_RS29790 (NYO12_29790) | 7770..8474 | - | 705 | WP_259075146.1 | IS6 family transposase IS15DI | Transposase |
| NYO12_RS29795 (NYO12_29795) | 8862..9143 | - | 282 | WP_259075187.1 | hypothetical protein | - |
| NYO12_RS29800 (NYO12_29800) | 9304..10050 | - | 747 | WP_259075148.1 | transposase zinc-binding domain-containing protein | - |
| NYO12_RS29805 (NYO12_29805) | 10303..11463 | + | 1161 | WP_023296974.1 | IS30 family transposase ISCfr4 | Transposase |
| NYO12_RS29810 (NYO12_29810) | 11601..12728 | - | 1128 | WP_117112698.1 | NADH-dependent flavin oxidoreductase | - |
| NYO12_RS29815 (NYO12_29815) | 12768..13601 | - | 834 | WP_259075149.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| NYO12_RS29820 (NYO12_29820) | 13745..14439 | + | 695 | WP_110192083.1 | IS1 family transposase IS1N | Transposase |
| NYO12_RS29825 (NYO12_29825) | 14436..15005 | - | 570 | WP_259075151.1 | fertility inhibition protein FinO | - |
| NYO12_RS29830 (NYO12_29830) | 15105..15827 | - | 723 | WP_259075153.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NYO12_RS29835 (NYO12_29835) | 15907..18615 | - | 2709 | Protein_15 | hypothetical protein | Relaxase |
| NYO12_RS29840 (NYO12_29840) | 19002..19418 | - | 417 | WP_023292164.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NYO12_RS29845 (NYO12_29845) | 19415..19726 | - | 312 | WP_023292165.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NYO12_RS29850 (NYO12_29850) | 19962..21449 | - | 1488 | WP_161267625.1 | hypothetical protein | VF |
| NYO12_RS29855 (NYO12_29855) | 21855..22283 | + | 429 | WP_259075156.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NYO12_RS29860 (NYO12_29860) | 22283..23554 | + | 1272 | WP_259075159.1 | Y-family DNA polymerase | - |
| NYO12_RS29865 (NYO12_29865) | 23636..24610 | - | 975 | WP_001568034.1 | ParB family protein | - |
| NYO12_RS29870 (NYO12_29870) | 24610..25815 | - | 1206 | WP_011977818.1 | AAA family ATPase | - |
| NYO12_RS29875 (NYO12_29875) | 25945..26016 | + | 72 | Protein_23 | hypothetical protein | - |
| NYO12_RS29880 (NYO12_29880) | 26264..27492 | + | 1229 | WP_153944503.1 | IS3 family transposase ISEc36 | Transposase |
| NYO12_RS29885 (NYO12_29885) | 27855..28610 | - | 756 | WP_063445611.1 | replication initiation protein RepE | - |
| NYO12_RS29890 (NYO12_29890) | 29135..29314 | + | 180 | WP_259075166.1 | hypothetical protein | - |
| NYO12_RS29895 (NYO12_29895) | 29462..30157 | - | 696 | WP_259075183.1 | IS6 family transposase ISEas1 | Transposase |
| NYO12_RS29900 (NYO12_29900) | 30490..31281 | - | 792 | WP_259075168.1 | site-specific integrase | - |
| NYO12_RS29905 (NYO12_29905) | 31278..31409 | - | 132 | WP_259075171.1 | hypothetical protein | - |
| NYO12_RS29910 (NYO12_29910) | 31530..31835 | - | 306 | WP_259075173.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NYO12_RS29915 (NYO12_29915) | 31837..32055 | - | 219 | WP_259075175.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NYO12_RS29920 (NYO12_29920) | 32645..33649 | + | 1005 | WP_259075177.1 | hypothetical protein | - |
| NYO12_RS29925 (NYO12_29925) | 33929..34012 | + | 84 | Protein_33 | IS6 family transposase | - |
| NYO12_RS29930 (NYO12_29930) | 34532..35524 | + | 993 | WP_168429828.1 | hypothetical protein | - |
| NYO12_RS29935 (NYO12_29935) | 35581..35712 | + | 132 | Protein_35 | ISNCY family transposase | - |
| NYO12_RS29940 (NYO12_29940) | 35709..36320 | - | 612 | WP_259075180.1 | DUF2913 family protein | - |
| NYO12_RS29945 (NYO12_29945) | 36374..36655 | - | 282 | WP_259075181.1 | cytoplasmic protein | - |
| NYO12_RS29950 (NYO12_29950) | 36703..37242 | - | 540 | WP_259075184.1 | HNH endonuclease | - |
| NYO12_RS29955 (NYO12_29955) | 38050..38331 | - | 282 | WP_259075182.1 | hypothetical protein | - |
| NYO12_RS29960 (NYO12_29960) | 38343..41108 | - | 2766 | Protein_40 | DUF637 domain-containing protein | - |
| NYO12_RS29965 (NYO12_29965) | 41142..41546 | - | 405 | WP_117110217.1 | IS66 family transposase ISEc22 | Transposase |
| NYO12_RS29970 (NYO12_29970) | 41754..43100 | - | 1347 | WP_196015380.1 | gluconate:H+ symporter | - |
| NYO12_RS29975 (NYO12_29975) | 43219..44133 | - | 915 | WP_080895923.1 | formyltetrahydrofolate deformylase | - |
| NYO12_RS29980 (NYO12_29980) | 44144..45043 | - | 900 | WP_080895924.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| NYO12_RS29985 (NYO12_29985) | 45168..46490 | - | 1323 | WP_259075106.1 | D-serine ammonia-lyase | - |
| NYO12_RS29990 (NYO12_29990) | 46553..47824 | - | 1272 | WP_080895926.1 | serine hydroxymethyltransferase | - |
| NYO12_RS29995 (NYO12_29995) | 47958..48911 | + | 954 | WP_259075108.1 | LysR family transcriptional regulator | - |
| NYO12_RS30000 (NYO12_30000) | 49314..49502 | + | 189 | WP_259075110.1 | hypothetical protein | - |
| NYO12_RS30005 (NYO12_30005) | 49511..50701 | + | 1191 | Protein_49 | IS91 family transposase | - |
| NYO12_RS30010 (NYO12_30010) | 51152..52300 | - | 1149 | WP_259075111.1 | galactonate dehydratase | - |
| NYO12_RS30015 (NYO12_30015) | 52297..52914 | - | 618 | WP_259075113.1 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | - |
| NYO12_RS30020 (NYO12_30020) | 52898..53776 | - | 879 | WP_259075115.1 | 2-dehydro-3-deoxygalactonokinase | - |
| NYO12_RS30025 (NYO12_30025) | 53773..54462 | - | 690 | WP_259075116.1 | D-galactonate utilization transcriptional regulator DgoR | - |
| NYO12_RS30030 (NYO12_30030) | 55927..56781 | + | 855 | WP_259075118.1 | MBL fold metallo-hydrolase | - |
| NYO12_RS30035 (NYO12_30035) | 56791..57045 | + | 255 | WP_259075119.1 | hypothetical protein | - |
| NYO12_RS30040 (NYO12_30040) | 57042..58352 | + | 1311 | WP_259075121.1 | MFS transporter | - |
| NYO12_RS30045 (NYO12_30045) | 58542..61529 | - | 2988 | WP_259075122.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| NYO12_RS30050 (NYO12_30050) | 61697..62332 | + | 636 | WP_259075124.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NYO12_RS30055 (NYO12_30055) | 62483..63397 | - | 915 | WP_117112705.1 | HTH-type transcriptional regulator PgrR | VF |
| NYO12_RS30060 (NYO12_30060) | 63559..64479 | + | 921 | WP_117112704.1 | alpha/beta hydrolase | - |
| NYO12_RS30065 (NYO12_30065) | 64541..65176 | + | 636 | WP_259075126.1 | SDR family oxidoreductase | - |
| NYO12_RS30070 (NYO12_30070) | 65246..66394 | + | 1149 | WP_117112703.1 | NADH-dependent flavin oxidoreductase | - |
| NYO12_RS30075 (NYO12_30075) | 66574..67473 | - | 900 | WP_117112702.1 | HTH-type transcriptional regulator PgrR | VF |
| NYO12_RS30080 (NYO12_30080) | 67612..68532 | + | 921 | WP_117112701.1 | alpha/beta hydrolase | - |
| NYO12_RS30085 (NYO12_30085) | 68532..69464 | + | 933 | WP_117112700.1 | alpha/beta hydrolase | - |
| NYO12_RS30090 (NYO12_30090) | 69483..70154 | + | 672 | Protein_66 | SDR family oxidoreductase | - |
| NYO12_RS30100 (NYO12_30100) | 71042..71830 | + | 789 | WP_259075128.1 | DsbA family protein | - |
| NYO12_RS30105 (NYO12_30105) | 71834..71971 | + | 138 | WP_259075129.1 | hypothetical protein | - |
| NYO12_RS30110 (NYO12_30110) | 71989..74986 | - | 2998 | Protein_70 | Tn3 family transposase ISEc63 | Transposase |
| NYO12_RS30115 (NYO12_30115) | 75146..75715 | + | 570 | WP_259075131.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NYO12_RS30120 (NYO12_30120) | 75723..76808 | + | 1086 | Protein_72 | hypothetical protein | - |
| NYO12_RS30125 (NYO12_30125) | 76866..77560 | + | 695 | WP_110192083.1 | IS1 family transposase IS1N | Transposase |
| NYO12_RS30130 (NYO12_30130) | 77575..77889 | + | 315 | Protein_74 | hypothetical protein | - |
| NYO12_RS30135 (NYO12_30135) | 77886..79952 | + | 2067 | WP_259075133.1 | DUF87 domain-containing protein | - |
| NYO12_RS30140 (NYO12_30140) | 80138..80557 | + | 420 | Protein_76 | Phospholipase D | VF |
| NYO12_RS30145 (NYO12_30145) | 80707..80967 | + | 261 | WP_016529614.1 | replication regulatory protein RepA | - |
| NYO12_RS30150 (NYO12_30150) | 81075..81244 | + | 170 | Protein_78 | protein CopA/IncA | - |
| NYO12_RS30155 (NYO12_30155) | 81263..81787 | + | 525 | Protein_79 | plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|