MGE detailed information
MGE type: Conjugative plasmid MGE length: 85443 bp
Accession: NZ_CP103332 Location: 1..85443 Organism: Escherichia coli strain ZY22049 Replicon: plasmid p3
Accession: NZ_CP103332 Location: 1..85443 Organism: Escherichia coli strain ZY22049 Replicon: plasmid p3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX000_RS25560 (46) | 46..1077 | + | 1032 | WP_272592198.1 | plasmid replication initiator RepA | - |
| NX000_RS25565 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NX000_RS25570 (2265) | 2265..2540 | + | 276 | WP_078165295.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NX000_RS25575 (2646) | 2646..2849 | + | 204 | Protein_3 | hypothetical protein | - |
| NX000_RS25580 (3119) | 3119..3385 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| NX000_RS25585 (3385) | 3385..3879 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| NX000_RS25590 (3935) | 3935..4537 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| NX000_RS25595 (4713) | 4713..5765 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| NX000_RS25600 (5978) | 5978..6568 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| NX000_RS25605 (6568) | 6568..6822 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| NX000_RS25610 (7390) | 7390..7803 | + | 414 | WP_001401590.1 | hypothetical protein | - |
| NX000_RS25615 (7805) | 7805..8584 | + | 780 | WP_052971527.1 | site-specific integrase | - |
| NX000_RS25620 (8764) | 8764..9408 | + | 645 | WP_001144036.1 | ParA family protein | - |
| NX000_RS25625 (9495) | 9495..9803 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| NX000_RS25630 (10216) | 10216..11196 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| NX000_RS25635 (11189) | 11189..11605 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| NX000_RS25640 (11607) | 11607..12881 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NX000_RS25645 (12881) | 12881..13318 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NX000_RS25650 (13315) | 13315..13563 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NX000_RS25655 (13981) | 13981..14883 | + | 903 | WP_097700263.1 | DUF1281 domain-containing protein | - |
| NX000_RS25660 (14887) | 14887..15192 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| NX000_RS25665 (15268) | 15268..15951 | + | 684 | WP_021513974.1 | DNA methylase | - |
| NX000_RS25670 (15952) | 15952..16173 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| NX000_RS25675 (16154) | 16154..16620 | + | 467 | Protein_23 | DUF1380 family protein | - |
| NX000_RS25680 (16671) | 16671..17441 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| NX000_RS25685 (17858) | 17858..18283 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| NX000_RS25690 (18330) | 18330..18752 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| NX000_RS25695 (18749) | 18749..18940 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| NX000_RS25700 (19078) | 19078..19359 | + | 282 | WP_162713425.1 | hypothetical protein | - |
| NX000_RS25705 (19711) | 19711..20238 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| NX000_RS25710 (20296) | 20296..20529 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| NX000_RS25715 (20588) | 20588..22546 | + | 1959 | WP_272592199.1 | ParB/RepB/Spo0J family partition protein | - |
| NX000_RS25720 (22601) | 22601..23035 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| NX000_RS25725 (23032) | 23032..23751 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| NX000_RS25730 (23748) | 23748..24344 | + | 597 | WP_272592200.1 | hypothetical protein | - |
| NX000_RS25735 (24807) | 24807..25307 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| NX000_RS25740 (25447) | 25447..25731 | - | 285 | WP_021013251.1 | hypothetical protein | - |
| NX000_RS25745 (26036) | 26036..26470 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NX000_RS25750 (26563) | 26563..26829 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NX000_RS25755 (26894) | 26894..27784 | + | 891 | WP_021513953.1 | ISNCY family transposase ISSen7 | VF |
| NX000_RS25760 (27847) | 27847..28041 | + | 195 | WP_001496986.1 | hypothetical protein | - |
| NX000_RS25765 (28072) | 28072..28323 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| NX000_RS25770 (28904) | 28904..29752 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| NX000_RS25775 (29838) | 29838..30173 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NX000_RS25780 (30407) | 30407..30739 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NX000_RS25785 (30750) | 30750..33449 | + | 2700 | WP_053264317.1 | hypothetical protein | Relaxase |
| NX000_RS25790 (33486) | 33486..35777 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| NX000_RS25795 (35770) | 35770..36840 | - | 1071 | WP_065523389.1 | IncI1-type conjugal transfer protein TrbB | - |
| NX000_RS25800 (36859) | 36859..38067 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| NX000_RS25805 (38285) | 38285..39238 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| NX000_RS25810 (39492) | 39492..40720 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| - (40768) | 40768..40825 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40768) | 40768..40825 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40768) | 40768..40825 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40768) | 40768..40825 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| NX000_RS25815 (40880) | 40880..41032 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| NX000_RS25820 (41104) | 41104..41355 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NX000_RS25825 (41854) | 41854..41949 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| NX000_RS25830 (42014) | 42014..42190 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| NX000_RS25835 (42522) | 42522..42731 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| NX000_RS25840 (42803) | 42803..43465 | - | 663 | WP_000644792.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NX000_RS25845 (43530) | 43530..45698 | - | 2169 | WP_000698366.1 | DotA/TraY family protein | - |
| NX000_RS25850 (45795) | 45795..46379 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| NX000_RS25855 (46408) | 46408..47610 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| NX000_RS25860 (47577) | 47577..48191 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NX000_RS25865 (48191) | 48191..51235 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| NX000_RS25870 (51325) | 51325..52125 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| NX000_RS25875 (52109) | 52109..52297 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NX000_RS25880 (52361) | 52361..52765 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| NX000_RS25885 (52816) | 52816..53343 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NX000_RS25890 (53343) | 53343..54047 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| NX000_RS25895 (54047) | 54047..55336 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| NX000_RS25900 (55339) | 55339..56322 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| NX000_RS25905 (56333) | 56333..57025 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NX000_RS25910 (57022) | 57022..57369 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NX000_RS25915 (57387) | 57387..61154 | - | 3768 | WP_006855639.1 | DUF5710 domain-containing protein | - |
| NX000_RS25920 (61244) | 61244..61795 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| NX000_RS25925 (61810) | 61810..62100 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NX000_RS25930 (62097) | 62097..63245 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| NX000_RS25935 (63242) | 63242..64060 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| NX000_RS25940 (64057) | 64057..64515 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NX000_RS25945 (64910) | 64910..65494 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| NX000_RS25950 (65554) | 65554..66756 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| NX000_RS25955 (66842) | 66842..67666 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| NX000_RS25960 (67817) | 67817..68971 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| NX000_RS25965 (69990) | 69990..70238 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| NX000_RS25970 (70235) | 70235..71527 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| NX000_RS25975 (71527) | 71527..72183 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| NX000_RS25980 (72168) | 72168..72728 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| NX000_RS25985 (72738) | 72738..73352 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| NX000_RS25990 (73369) | 73369..74454 | - | 1086 | WP_001208803.1 | hypothetical protein | VF |
| NX000_RS25995 (74467) | 74467..76020 | - | 1554 | WP_000362204.1 | hypothetical protein | VF |
| NX000_RS26000 (76031) | 76031..76483 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| NX000_RS26005 (76470) | 76470..77765 | - | 1296 | WP_021513967.1 | type 4b pilus protein PilO2 | - |
| NX000_RS26010 (77758) | 77758..79440 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NX000_RS26015 (79454) | 79454..79891 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| NX000_RS26020 (79891) | 79891..80958 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| NX000_RS26025 (81710) | 81710..81964 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NX000_RS26030 (82136) | 82136..82819 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| NX000_RS26035 (83073) | 83073..83606 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| NX000_RS26040 (84048) | 84048..84335 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NX000_RS26045 (84253) | 84253..84531 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|