MGE detailed information
MGE type: IScluster/Tn MGE length: 8696 bp
Accession: NZ_CP102948 Location: 78846..87541 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: plasmid unnamed1
Accession: NZ_CP102948 Location: 78846..87541 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW339_RS25065 (74149) | 74149..74337 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| NW339_RS25070 (74458) | 74458..75198 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| NW339_RS25075 (75483) | 75483..76460 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| NW339_RS25080 (77216) | 77216..78187 | + | 972 | Protein_92 | hypothetical protein | - |
| NW339_RS25085 (78346) | 78346..78504 | - | 159 | WP_228955855.1 | abortive infection family protein | - |
| NW339_RS25090 (78652) | 78652..79349 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| NW339_RS25095 (79365) | 79365..79694 | + | 330 | Protein_95 | TOBE domain-containing protein | - |
| NW339_RS25100 (79803) | 79803..80735 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| NW339_RS25105 (80722) | 80722..82125 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| NW339_RS25110 (82369) | 82369..83349 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| NW339_RS25115 (83559) | 83559..83909 | + | 351 | WP_233291431.1 | type I deoxyribonuclease HsdR | - |
| NW339_RS25120 (83844) | 83844..84257 | - | 414 | Protein_100 | IS3 family transposase ISLad1 | Transposase |
| NW339_RS25125 (84262) | 84262..84540 | - | 279 | Protein_101 | pdcB | - |
| NW339_RS25130 (84568) | 84568..84747 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| NW339_RS25135 (84752) | 84752..85132 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NW339_RS25140 (85132) | 85132..85353 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NW339_RS25145 (85536) | 85536..86792 | + | 1257 | Protein_105 | type I restriction-modification system subunit M | - |
| NW339_RS25150 (86844) | 86844..87541 | + | 698 | WP_223216377.1 | IS1 family transposase IS1G | Transposase |
| NW339_RS25155 (87678) | 87678..88571 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| NW339_RS25160 (88614) | 88614..89609 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| NW339_RS25165 (90317) | 90317..90535 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NW339_RS25170 (90537) | 90537..90842 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NW339_RS25175 (90843) | 90843..91649 | + | 807 | WP_000016982.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|