MGE detailed information
MGE type: Genomic_island MGE length: 10041 bp
Accession: NZ_CP102749 Location: 4407078..4417118 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Accession: NZ_CP102749 Location: 4407078..4417118 Organism: Pectobacterium parvum strain YT22221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV347_RS19835 (NV347_19835) | 4402975..4404327 | + | 1353 | WP_039512786.1 | pyridoxal-dependent decarboxylase | - |
| NV347_RS19840 (NV347_19840) | 4404421..4404879 | - | 459 | WP_010286715.1 | hypothetical protein | - |
| NV347_RS19845 (NV347_19845) | 4405110..4406438 | + | 1329 | WP_161546580.1 | IS4 family transposase | - |
| NV347_RS19850 (NV347_19850) | 4406744..4407004 | + | 261 | WP_039482487.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NV347_RS19855 (NV347_19855) | 4407078..4407449 | + | 372 | WP_039482489.1 | helix-turn-helix transcriptional regulator | - |
| NV347_RS19860 (NV347_19860) | 4407608..4408024 | - | 417 | WP_039482106.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NV347_RS19865 (NV347_19865) | 4408021..4408332 | - | 312 | WP_039482109.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NV347_RS19870 (NV347_19870) | 4409761..4410054 | - | 294 | WP_102117148.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
| NV347_RS19875 (NV347_19875) | 4410055..4410972 | - | 918 | WP_012822191.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
| NV347_RS19880 (NV347_19880) | 4411000..4411647 | - | 648 | WP_039512784.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| NV347_RS19885 (NV347_19885) | 4411647..4412381 | - | 735 | WP_165708412.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| NV347_RS19890 (NV347_19890) | 4412391..4413458 | - | 1068 | WP_039512782.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| NV347_RS19895 (NV347_19895) | 4413462..4414109 | - | 648 | WP_039482124.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| NV347_RS19900 (NV347_19900) | 4414102..4415664 | - | 1563 | WP_039482127.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| NV347_RS19905 (NV347_19905) | 4416279..4416641 | + | 363 | WP_039482128.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NV347_RS19910 (NV347_19910) | 4416645..4417118 | + | 474 | WP_039482130.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NV347_RS19915 (NV347_19915) | 4417108..4419825 | - | 2718 | WP_052012030.1 | CRISPR-associated helicase/endonuclease Cas3 | - |
| NV347_RS19920 (NV347_19920) | 4419857..4420408 | - | 552 | WP_039482132.1 | polymer-forming cytoskeletal protein | - |
| NV347_RS19925 (NV347_19925) | 4420578..4420766 | - | 189 | WP_039482134.1 | hypothetical protein | - |
| NV347_RS19930 (NV347_19930) | 4421091..4422014 | + | 924 | WP_165708413.1 | aminoimidazole riboside kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|