MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54149 bp
Accession: NZ_CP102697 Location: 1..54149 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-3
Accession: NZ_CP102697 Location: 1..54149 Organism: Escherichia coli strain GN4554 Replicon: plasmid pGN4554-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NV952_RS23775 (194) | 194..595 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NV952_RS23780 (528) | 528..785 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NV952_RS23785 (878) | 878..1531 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| NV952_RS23790 (2470) | 2470..3327 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| NV952_RS23795 (3320) | 3320..3394 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| NV952_RS23800 (3630) | 3630..3887 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| NV952_RS23805 (4171) | 4171..4320 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (4364) | 4364..4425 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (4364) | 4364..4425 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (4364) | 4364..4425 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (4364) | 4364..4425 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| NV952_RS23810 (4564) | 4564..4746 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| NV952_RS23815 (4847) | 4847..5463 | + | 617 | Protein_8 | IS1-like element IS1A family transposase | - |
| NV952_RS23820 (5501) | 5501..7072 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| NV952_RS23825 (7092) | 7092..7439 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NV952_RS23830 (7439) | 7439..8116 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| NV952_RS23835 (8171) | 8171..8260 | + | 90 | Protein_12 | IS1 family transposase | - |
| NV952_RS23840 (8561) | 8561..8773 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| NV952_RS23845 (8907) | 8907..9467 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| NV952_RS23850 (9522) | 9522..10298 | - | 777 | WP_086625070.1 | conjugal transfer pilus acetylase TraX | - |
| NV952_RS23855 (10237) | 10237..10407 | - | 171 | WP_086625069.1 | hypothetical protein | - |
| NV952_RS23860 (10404) | 10404..10826 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| NV952_RS23865 (10873) | 10873..11298 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| NV952_RS23870 (11712) | 11712..12482 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| NV952_RS23875 (12527) | 12527..13045 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| NV952_RS23880 (12975) | 12975..13196 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| NV952_RS23885 (13197) | 13197..13880 | - | 684 | WP_032181561.1 | DNA methylase | - |
| NV952_RS23890 (13957) | 13957..14268 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| NV952_RS23895 (14265) | 14265..15167 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| NV952_RS23900 (15905) | 15905..16876 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NV952_RS23905 (16876) | 16876..18042 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| NV952_RS23910 (18630) | 18630..19385 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| NV952_RS23915 (20107) | 20107..20913 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| NV952_RS23920 (20914) | 20914..21219 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NV952_RS23925 (21221) | 21221..21439 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| NV952_RS23930 (21999) | 21999..22229 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| NV952_RS23935 (22226) | 22226..22642 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NV952_RS23940 (22717) | 22717..24282 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| NV952_RS23945 (24267) | 24267..25289 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| NV952_RS23955 (26766) | 26766..28967 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| NV952_RS23960 (28993) | 28993..30326 | - | 1334 | Protein_37 | L-lysine N6-monooxygenase | VF |
| NV952_RS23965 (30323) | 30323..32065 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| NV952_RS23970 (32065) | 32065..33012 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| NV952_RS23975 (33013) | 33013..34737 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| NV952_RS23980 (34873) | 34873..36066 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| NV952_RS23985 (36446) | 36446..36826 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| NV952_RS23990 (37167) | 37167..37580 | - | 414 | Protein_43 | phosphopyruvate hydratase | - |
| NV952_RS23995 (37578) | 37578..37835 | + | 258 | Protein_44 | Tn3 family transposase | - |
| NV952_RS24000 (38069) | 38069..38926 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| NV952_RS24005 (38923) | 38923..39780 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| NV952_RS24010 (39777) | 39777..40604 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| NV952_RS24015 (40604) | 40604..41518 | - | 915 | WP_000949005.1 | putative periplasmic iron-binding protein | VF |
| NV952_RS24020 (41874) | 41874..42571 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| NV952_RS24025 (42751) | 42751..43264 | - | 514 | Protein_50 | DUF4113 domain-containing protein | - |
| NV952_RS24030 (43325) | 43325..43429 | - | 105 | Protein_51 | AAA family ATPase | - |
| NV952_RS24035 (43431) | 43431..43754 | - | 324 | Protein_52 | IS21 family transposase IS21 | Transposase |
| NV952_RS24040 (44500) | 44500..45477 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NV952_RS24045 (45762) | 45762..46502 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| NV952_RS24050 (46623) | 46623..46811 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| NV952_RS24055 (47178) | 47178..48347 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| NV952_RS24060 (48573) | 48573..48748 | - | 176 | Protein_57 | IS3 family transposase | - |
| NV952_RS24065 (49194) | 49194..49466 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| NV952_RS24070 (50003) | 50003..50427 | - | 425 | Protein_59 | IS3 family transposase IS2 | Transposase |
| NV952_RS24075 (50709) | 50709..52679 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| NV952_RS24080 (52686) | 52686..53477 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| NV952_RS24085 (53540) | 53540..54148 | - | 609 | Protein_62 | IS66 family transposase ISEc22 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|