NZ_CP1026793769809..3941514

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 171706 bp
Accession: NZ_CP102679        Location: 3769809..3941514         Organism: Escherichia coli strain XH989       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NU949_RS20485 (3765202) 3765202..3765438 - 237 WP_001350028.1 DUF1435 domain-containing protein -
NU949_RS20490 (3765579) 3765579..3766367 + 789 WP_000331602.1 siderophore-iron reductase FhuF -
NU949_RS20495 (3766405) 3766405..3767082 - 678 WP_001300509.1 DNA-binding transcriptional activator BglJ -
NU949_RS20500 (3767040) 3767040..3767765 - 726 WP_000936630.1 response regulator transcription factor -
NU949_RS20505 (3768160) 3768160..3769374 + 1215 Protein_3603 DNA primase -
NU949_RS20510 (3769392) 3769392..3769739 + 348 WP_001055900.1 conjugal transfer protein -
NU949_RS20515 (3769736) 3769736..3770428 + 693 WP_000138552.1 DotI/IcmL family type IV secretion protein -
NU949_RS20520 (3770439) 3770439..3771422 + 984 WP_001191880.1 hypothetical protein VF
NU949_RS20525 (3771425) 3771425..3772714 + 1290 WP_011264042.1 conjugal transfer protein TraO -
NU949_RS20530 (3772714) 3772714..3773418 + 705 WP_001493811.1 IncI1-type conjugal transfer protein TraP -
NU949_RS20535 (3773418) 3773418..3773945 + 528 WP_001055569.1 conjugal transfer protein TraQ -
NU949_RS20540 (3773996) 3773996..3774400 + 405 WP_000086965.1 IncI1-type conjugal transfer protein TraR -
NU949_RS20545 (3774464) 3774464..3774652 + 189 WP_001277255.1 putative conjugal transfer protein TraS -
NU949_RS20550 (3774636) 3774636..3774758 + 123 Protein_3612 conjugal transfer protein TraT -
NU949_RS20555 (3774846) 3774846..3775868 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
NU949_RS20560 (3775865) 3775865..3776647 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
NU949_RS20565 (3776715) 3776715..3777395 + 681 Protein_3615 IncI1-type conjugal transfer protein TraT -
NU949_RS20570 (3777485) 3777485..3780529 + 3045 WP_012783939.1 IncI1-type conjugal transfer protein TraU -
NU949_RS20575 (3780529) 3780529..3781143 + 615 WP_000337394.1 IncI1-type conjugal transfer protein TraV -
NU949_RS20580 (3781110) 3781110..3782312 + 1203 WP_012783938.1 IncI1-type conjugal transfer protein TraW -
NU949_RS20585 (3782341) 3782341..3782925 + 585 WP_012783937.1 conjugal transfer protein TraX -
NU949_RS20590 (3783022) 3783022..3785190 + 2169 WP_015508354.1 DotA/TraY family protein -
NU949_RS20595 (3785261) 3785261..3785923 + 663 WP_012783935.1 plasmid IncI1-type surface exclusion protein ExcA -
NU949_RS20600 (3785995) 3785995..3786204 - 210 WP_000062603.1 HEAT repeat domain-containing protein -
NU949_RS20605 (3786596) 3786596..3786772 + 177 WP_001054900.1 hypothetical protein -
NU949_RS20610 (3786837) 3786837..3787133 - 297 WP_011264046.1 DinQ-like type I toxin DqlB -
NU949_RS20615 (3787377) 3787377..3788345 + 969 WP_000654811.1 IS5 family transposase IS903B Transposase
NU949_RS20620 (3788498) 3788498..3788749 + 252 WP_001291964.1 hypothetical protein -
NU949_RS20625 (3788821) 3788821..3788973 - 153 WP_001387489.1 Hok/Gef family protein -
NU949_RS20630 (3789294) 3789294..3790379 + 1086 WP_000080543.1 protein finQ -
NU949_RS20635 (3790686) 3790686..3791894 + 1209 WP_001703845.1 IncI1-type conjugal transfer protein TrbA -
NU949_RS20640 (3791913) 3791913..3792983 + 1071 WP_012783932.1 IncI1-type conjugal transfer protein TrbB -
NU949_RS20645 (3792976) 3792976..3795267 + 2292 WP_012783931.1 F-type conjugative transfer protein TrbC -
NU949_RS20650 (3795304) 3795304..3798003 - 2700 WP_012783930.1 IncI1-type relaxase NikB -
NU949_RS20655 (3798014) 3798014..3798346 - 333 WP_001283947.1 IncI1-type relaxosome accessory protein NikA -
NU949_RS20660 (3798580) 3798580..3798915 + 336 WP_000157082.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
NU949_RS20665 (3799001) 3799001..3799849 - 849 WP_012783929.1 DUF4942 domain-containing protein -
NU949_RS20670 (3800429) 3800429..3800680 + 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
NU949_RS20675 (3800711) 3800711..3800917 - 207 WP_000150314.1 hypothetical protein VF
NU949_RS20680 (3800979) 3800979..3801881 - 903 WP_023150544.1 ISNCY family transposase ISRor2 VF
NU949_RS20685 (3801878) 3801878..3802267 - 390 WP_000833767.1 hypothetical protein -
NU949_RS20690 (3802444) 3802444..3802710 - 267 WP_000804663.1 hypothetical protein -
NU949_RS20695 (3802804) 3802804..3803238 - 435 WP_000218858.1 hypothetical protein -
NU949_RS20700 (3803967) 3803967..3804467 - 501 WP_000117626.1 antirestriction protein ArdA -
NU949_RS20705 (3804929) 3804929..3805525 - 597 WP_000977995.1 hypothetical protein -
NU949_RS20710 (3805522) 3805522..3806241 - 720 WP_012783927.1 plasmid SOS inhibition protein A -
NU949_RS20715 (3806238) 3806238..3806672 - 435 WP_001402001.1 conjugation system SOS inhibitor PsiB -
NU949_RS20720 (3806725) 3806725..3808683 - 1959 WP_063267868.1 ParB/RepB/Spo0J family partition protein -
NU949_RS20725 (3808742) 3808742..3808975 - 234 WP_015508350.1 DUF905 domain-containing protein -
NU949_RS20730 (3809033) 3809033..3809560 - 528 WP_012783926.1 single-stranded DNA-binding protein -
NU949_RS20735 (3810742) 3810742..3812409 + 1668 WP_258383338.1 group II intron reverse transcriptase/maturase -
NU949_RS20740 (3812688) 3812688..3812879 - 192 WP_001027516.1 hypothetical protein -
NU949_RS20745 (3812876) 3812876..3813298 - 423 WP_000271703.1 DUF1380 family protein -
NU949_RS20750 (3813345) 3813345..3813770 - 426 WP_001198889.1 antirestriction protein -
NU949_RS20755 (3814183) 3814183..3814953 - 771 WP_012783922.1 hypothetical protein -
NU949_RS20760 (3814998) 3814998..3815516 - 519 WP_223350510.1 DUF1380 family protein -
NU949_RS20765 (3815446) 3815446..3815667 - 222 WP_001104873.1 hypothetical protein -
NU949_RS20770 (3815668) 3815668..3816351 - 684 WP_000086127.1 DNA methylase -
NU949_RS20775 (3816427) 3816427..3816738 - 312 WP_033863049.1 hypothetical protein -
NU949_RS20780 (3816742) 3816742..3817164 - 423 WP_000774832.1 plasmid partitioning/stability family protein -
NU949_RS20785 (3817167) 3817167..3818147 - 981 WP_012783921.1 plasmid segregation protein ParM -
NU949_RS20790 (3818485) 3818485..3818820 + 336 WP_001340323.1 hypothetical protein -
NU949_RS20795 (3818825) 3818825..3818911 - 87 Protein_3661 hypothetical protein -
NU949_RS20800 (3818915) 3818915..3819817 - 903 WP_001739825.1 DUF1281 domain-containing protein -
NU949_RS20805 (3820235) 3820235..3820483 + 249 WP_000618110.1 DinI-like family protein -
NU949_RS20810 (3820480) 3820480..3820917 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NU949_RS20815 (3820917) 3820917..3822188 + 1272 WP_001703910.1 Y-family DNA polymerase -
NU949_RS20820 (3822384) 3822384..3823010 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
NU949_RS20825 (3823007) 3823007..3823309 + 303 WP_001245884.1 hypothetical protein -
NU949_RS20830 (3823840) 3823840..3825234 - 1395 WP_023150520.1 protein YagA -
NU949_RS20835 (3825177) 3825177..3825521 + 345 Protein_3669 WbuC family cupin fold metalloprotein -
NU949_RS20840 (3825568) 3825568..3826443 - 876 WP_015387340.1 Beta-lactamase CTX-M-1 ARG
NU949_RS20845 (3826712) 3826712..3827692 + 981 WP_072649545.1 IS5 family transposase ISKpn26 Transposase
NU949_RS20850 (3827899) 3827899..3829161 - 1263 WP_258383339.1 IS1380 family transposase ISEcp1 Transposase
NU949_RS20855 (3829582) 3829582..3830352 + 771 WP_029402187.1 threonine/serine exporter ThrE family protein -
NU949_RS20860 (3830343) 3830343..3830816 + 474 WP_000538188.1 threonine/serine exporter -
NU949_RS20865 (3830923) 3830923..3831462 + 540 WP_000098816.1 primosomal protein DnaT -
NU949_RS20870 (3831465) 3831465..3832202 + 738 WP_000799911.1 IS21 family transposase ISSme2 Transposase
NU949_RS20875 (3832251) 3832251..3832745 + 495 WP_001308243.1 DUF2501 domain-containing protein YjjA -
NU949_RS20880 (3832999) 3832999..3835290 + 2292 WP_001292653.1 phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase -
NU949_RS20885 (3835429) 3835429..3836451 - 1023 WP_000106030.1 L-galactonate oxidoreductase -
NU949_RS20890 (3836590) 3836590..3837504 + 915 WP_000091569.1 GntR family transcriptional regulator -
NU949_RS20895 (3837719) 3837719..3839080 + 1362 WP_000410129.1 MFS transporter -
NU949_RS20900 (3839129) 3839129..3840793 - 1665 WP_000919567.1 Methyl-accepting chemotaxis protein I VF
NU949_RS20905 (3840912) 3840912..3841358 - 447 WP_000543915.1 homoprotocatechuate degradation operon regulator HpaR -
NU949_RS20910 (3841630) 3841630..3842919 + 1290 WP_000679092.1 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase -
NU949_RS20915 (3842916) 3842916..3844382 + 1467 WP_000757512.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase -
NU949_RS20920 (3844384) 3844384..3845235 + 852 WP_000516990.1 3,4-dihydroxyphenylacetate 2,3-dioxygenase -
NU949_RS20925 (3845245) 3845245..3845625 + 381 WP_001119864.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase -
NU949_RS20930 (3845736) 3845736..3846539 + 804 WP_000459750.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase -
NU949_RS20935 (3846550) 3846550..3847338 + 789 WP_000431705.1 4-hydroxy-2-oxoheptanedioate aldolase -
NU949_RS20940 (3847513) 3847513..3848889 + 1377 WP_001285769.1 4-hydroxyphenylacetate permease -
NU949_RS20945 (3848899) 3848899..3849789 + 891 WP_000332891.1 4-hydroxyphenylacetate catabolism regulatory protein HpaA -
NU949_RS20950 (3850040) 3850040..3851602 + 1563 WP_029402184.1 4-hydroxyphenylacetate 3-monooxygenase oxygenase component VF
NU949_RS20955 (3851620) 3851620..3852132 + 513 WP_001175455.1 4-hydroxyphenylacetate 3-monooxygenase reductase subunit -
NU949_RS20960 (3852522) 3852522..3854672 + 2151 WP_001298933.1 pyruvate/proton symporter BtsT -
NU949_RS20965 (3854803) 3854803..3855006 + 204 WP_000467859.1 YbdD/YjiX family protein -
NU949_RS20970 (3855017) 3855017..3855973 + 957 WP_001295525.1 GTPase -
NU949_RS20975 (3856007) 3856007..3856309 - 303 WP_019842999.1 BrnA antitoxin family protein Antitoxin Detail
NU949_RS20980 (3856296) 3856296..3856583 - 288 WP_001131965.1 BrnT family toxin Toxin Detail
NU949_RS20985 (3856780) 3856780..3857946 + 1167 WP_000800825.1 restriction endonuclease -
NU949_RS20990 (3858010) 3858010..3859629 + 1620 WP_001029743.1 class I SAM-dependent DNA methyltransferase -
NU949_RS20995 (3859619) 3859619..3861043 + 1425 WP_000535015.1 restriction endonuclease subunit S -
NU949_RS21000 (3861138) 3861138..3864401 + 3264 WP_000058885.1 HsdR family type I site-specific deoxyribonuclease -
NU949_RS21005 (3864616) 3864616..3864954 + 339 WP_000132624.1 endoribonuclease SymE -
NU949_RS21010 (3865042) 3865042..3865194 - 153 WP_229018381.1 cytoplasmic protein -
NU949_RS21015 (3865337) 3865337..3866749 + 1413 WP_000199313.1 PLP-dependent aminotransferase family protein -
NU949_RS21020 (3866992) 3866992..3867936 - 945 WP_000181173.1 ISNCY family transposase ISRor2 VF
NU949_RS21025 (3868404) 3868404..3869636 + 1233 WP_001137015.1 multidrug efflux MFS transporter MdtM -
NU949_RS21030 (3869677) 3869677..3870957 + 1281 WP_001037392.1 DUF445 domain-containing protein -
NU949_RS21035 (3871073) 3871073..3872224 + 1152 WP_001307557.1 double-cubane-cluster-containing anaerobic reductase -
NU949_RS21040 (3872234) 3872234..3873001 + 768 WP_000222495.1 putative 2-hydroxyacyl-CoA dehydratase activator YjiL -
NU949_RS21045 (3872998) 3872998..3873255 + 258 WP_000657676.1 DUF3343 domain-containing protein -
NU949_RS21050 (3873320) 3873320..3874180 + 861 WP_001298932.1 YjiK family protein -
NU949_RS21055 (3874248) 3874248..3875426 + 1179 WP_001141192.1 MFS transporter -
NU949_RS21060 (3875439) 3875439..3875993 - 555 WP_001151854.1 RNA 2'-phosphotransferase -
NU949_RS21065 (3876243) 3876243..3876926 + 684 WP_072649507.1 nucleoside recognition domain-containing protein -
NU949_RS21070 (3876923) 3876923..3877384 + 462 WP_000211971.1 YjiG family protein -
NU949_RS21075 (3877397) 3877397..3878569 + 1173 WP_000568406.1 beta-aspartyl-peptidase -
NU949_RS21080 (3878634) 3878634..3879545 + 912 WP_000340764.1 hypochlorite stress DNA-binding transcriptional regulator HypT -
NU949_RS21085 (3879538) 3879538..3879930 - 393 WP_000986215.1 anti-adapter protein IraD -
NU949_RS21090 (3879927) 3879927..3880010 - 84 WP_120795393.1 iraD leader peptide IdlP -
NU949_RS21095 (3880603) 3880603..3881433 + 831 WP_000062558.1 DUF2686 family protein -
NU949_RS21100 (3881574) 3881574..3882347 - 774 WP_000833679.1 Uxu operon transcriptional regulator -
NU949_RS21105 (3882562) 3882562..3884022 - 1461 WP_029402182.1 fructuronate reductase -
NU949_RS21110 (3884103) 3884103..3885287 - 1185 WP_000438591.1 mannonate dehydratase -
NU949_RS21115 (3885627) 3885627..3886970 + 1344 WP_000558251.1 gluconate permease GntP -
NU949_RS21120 (3887213) 3887213..3888115 - 903 WP_000832227.1 Type 1 fimbrin D-mannose specific adhesin VF
NU949_RS21125 (3888135) 3888135..3888638 - 504 WP_000870592.1 Protein FimG VF
NU949_RS21130 (3888651) 3888651..3889181 - 531 WP_042630973.1 Protein FimF VF
NU949_RS21135 (3889191) 3889191..3891827 - 2637 WP_000120942.1 Outer membrane usher protein FimD VF
NU949_RS21140 (3891894) 3891894..3892619 - 726 WP_000066540.1 Chaperone protein FimC VF
NU949_RS21145 (3892656) 3892656..3893195 - 540 WP_000824109.1 putative major fimbrial subunit LpfA VF
NU949_RS21150 (3893260) 3893260..3893808 - 549 WP_000695561.1 Type-1 fimbrial protein, A chain VF
NU949_RS21155 (3894289) 3894289..3894885 - 597 WP_000044711.1 ISKra4 family transposase ISCep1 VF
NU949_RS21160 (3895363) 3895363..3895965 - 603 WP_000790583.1 ISKra4 family transposase ISCep1 VF
NU949_RS21165 (3897419) 3897419..3898135 + 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
NU949_RS21170 (3898155) 3898155..3899261 + 1107 WP_001295733.1 N-acetylneuraminate epimerase -
NU949_RS21175 (3899325) 3899325..3900305 + 981 WP_000991462.1 sialate O-acetylesterase -
NU949_RS21180 (3900415) 3900415..3900620 + 206 Protein_3738 HNH endonuclease -
NU949_RS21185 (3900888) 3900888..3902114 - 1227 Protein_3739 helicase YjhR -
NU949_RS21190 (3902246) 3902246..3902491 + 246 WP_001420158.1 GNAT family N-acetyltransferase -
NU949_RS21195 (3902868) 3902868..3903125 + 258 WP_001054379.1 YjhX family toxin -
NU949_RS21200 (3903137) 3903137..3903684 + 548 Protein_3742 N-acetyltransferase -
NU949_RS21205 (3903740) 3903740..3904486 + 747 WP_000354249.1 class I SAM-dependent methyltransferase -
NU949_RS21210 (3904656) 3904656..3904874 + 219 WP_001348444.1 hypothetical protein -
NU949_RS21215 (3904912) 3904912..3905028 + 117 Protein_3745 VOC family protein -
NU949_RS21220 (3905273) 3905273..3906394 + 1122 WP_000010833.1 M42 family metallopeptidase -
NU949_RS21225 (3906391) 3906391..3906669 + 279 WP_000722973.1 PTS sugar transporter subunit IIB SgcB -
NU949_RS21230 (3906681) 3906681..3907994 + 1314 WP_029402181.1 PTS sugar transporter subunit IIC SgcC -
NU949_RS21235 (3908007) 3908007..3908813 + 807 WP_000118626.1 BtpA family protein SgcQ -
NU949_RS21240 (3908944) 3908944..3909375 + 432 WP_000606405.1 SgcA family PTS sugar transporter subunit IIA -
NU949_RS21245 (3909387) 3909387..3910019 + 633 WP_000600624.1 ribulose-phosphate 3 epimerase family protein -
NU949_RS21250 (3910036) 3910036..3910818 + 783 WP_000082779.1 DeoR/GlpR family DNA-binding transcription regulator -
NU949_RS21255 (3911121) 3911121..3911909 + 789 WP_000251800.1 IclR family transcriptional regulator -
NU949_RS21260 (3911914) 3911914..3912819 + 906 WP_000714563.1 dihydrodipicolinate synthase family protein -
NU949_RS21265 (3912830) 3912830..3914797 + 1968 WP_000116325.1 xylonate dehydratase YjhG -
NU949_RS21270 (3914904) 3914904..3916253 + 1350 WP_001128363.1 GntP family permease -
NU949_RS21275 (3916600) 3916600..3917586 + 987 WP_000373366.1 sugar-binding transcriptional regulator -
NU949_RS21280 (3917627) 3917627..3918631 - 1005 WP_000471144.1 GRP family sugar transporter -
NU949_RS21285 (3918735) 3918735..3919376 - 642 WP_000439686.1 L-fuculose-phosphate aldolase -
NU949_RS21290 (3919407) 3919407..3920522 - 1116 WP_001022015.1 S-methyl-5-thioribose-1-phosphate isomerase -
NU949_RS21295 (3920532) 3920532..3921791 - 1260 WP_000132325.1 S-methyl-5-thioribose kinase -
NU949_RS21300 (3922591) 3922591..3923528 + 938 Protein_3762 glycosyltransferase -
NU949_RS21305 (3923949) 3923949..3926024 + 2076 WP_000366620.1 AAA family ATPase -
NU949_RS21310 (3926017) 3926017..3927303 + 1287 WP_000504875.1 McrC family protein -
NU949_RS21315 (3927413) 3927413..3929149 + 1737 WP_042630974.1 Alw26I/Eco31I/Esp3I family type II restriction endonuclease -
NU949_RS21320 (3929162) 3929162..3930352 - 1191 WP_001295727.1 DNA (cytosine-5-)-methyltransferase -
NU949_RS21325 (3930345) 3930345..3931967 - 1623 WP_001295726.1 Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase -
NU949_RS21330 (3932437) 3932437..3933978 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
NU949_RS21335 (3934572) 3934572..3934748 - 177 Protein_3769 IS3 family transposase ISSen1 Transposase
NU949_RS21340 (3935115) 3935115..3935264 - 150 Protein_3770 hypothetical protein -
NU949_RS21345 (3935370) 3935370..3935546 - 177 WP_000839286.1 DUF957 domain-containing protein -
NU949_RS21350 (3935563) 3935563..3936051 - 489 WP_000761690.1 DUF5983 family protein -
NU949_RS21355 (3936048) 3936048..3936425 - 378 WP_000854759.1 TA system toxin CbtA family protein Toxin Detail
NU949_RS21360 (3936515) 3936515..3936883 - 369 WP_001295723.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
NU949_RS21365 (3937046) 3937046..3937267 - 222 WP_000692345.1 DUF987 domain-containing protein -
NU949_RS21370 (3937330) 3937330..3937806 - 477 WP_001186775.1 RadC family protein -
NU949_RS21375 (3937822) 3937822..3938295 - 474 WP_000855059.1 antirestriction protein -
NU949_RS21380 (3938635) 3938635..3939453 - 819 WP_042631095.1 DUF932 domain-containing protein -
NU949_RS21385 (3939571) 3939571..3939766 - 196 Protein_3779 DUF905 family protein -
NU949_RS21390 (3939837) 3939837..3940055 - 219 WP_072649508.1 autotransporter domain-containing protein -
NU949_RS21395 (3940112) 3940112..3941134 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
NU949_RS21400 (3941131) 3941131..3941913 + 783 WP_001317493.1 IS21-like element IS100kyp family helper ATPase IstB -
NU949_RS21405 (3941979) 3941979..3942833 - 855 Protein_3783 autotransporter adhesin family protein -
NU949_RS21410 (3943869) 3943869..3944471 - 603 WP_000813435.1 hypothetical protein -
NU949_RS21415 (3944567) 3944567..3944773 - 207 WP_000211308.1 helix-turn-helix domain-containing protein -
NU949_RS21420 (3945547) 3945547..3945696 + 150 WP_071526287.1 Hha/YmoA family nucleoid-associated regulatory protein -
NU949_RS21425 (3946029) 3946029..3946226 - 198 WP_001547002.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance