NZ_CP1026751934407..2106111

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 171705 bp
Accession: NZ_CP102675        Location: 1934407..2106111         Organism: Escherichia coli strain XH987       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NU950_RS11285 (1929800) 1929800..1930036 - 237 WP_001350028.1 DUF1435 domain-containing protein -
NU950_RS11290 (1930177) 1930177..1930965 + 789 WP_000331602.1 siderophore-iron reductase FhuF -
NU950_RS11295 (1931003) 1931003..1931680 - 678 WP_001300509.1 DNA-binding transcriptional activator BglJ -
NU950_RS11300 (1931638) 1931638..1932363 - 726 WP_000936630.1 response regulator transcription factor -
NU950_RS11305 (1932758) 1932758..1933972 + 1215 Protein_1834 DNA primase -
NU950_RS11310 (1933990) 1933990..1934337 + 348 WP_001055900.1 conjugal transfer protein -
NU950_RS11315 (1934334) 1934334..1935026 + 693 WP_000138552.1 DotI/IcmL family type IV secretion protein -
NU950_RS11320 (1935037) 1935037..1936020 + 984 WP_001191880.1 hypothetical protein VF
NU950_RS11325 (1936023) 1936023..1937312 + 1290 WP_011264042.1 conjugal transfer protein TraO -
NU950_RS11330 (1937312) 1937312..1938016 + 705 WP_001493811.1 IncI1-type conjugal transfer protein TraP -
NU950_RS11335 (1938016) 1938016..1938543 + 528 WP_001055569.1 conjugal transfer protein TraQ -
NU950_RS11340 (1938594) 1938594..1938998 + 405 WP_000086965.1 IncI1-type conjugal transfer protein TraR -
NU950_RS11345 (1939062) 1939062..1939250 + 189 WP_001277255.1 putative conjugal transfer protein TraS -
NU950_RS11350 (1939234) 1939234..1939356 + 123 Protein_1843 conjugal transfer protein TraT -
NU950_RS11355 (1939444) 1939444..1940466 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
NU950_RS11360 (1940463) 1940463..1941245 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
NU950_RS11365 (1941313) 1941313..1941993 + 681 Protein_1846 IncI1-type conjugal transfer protein TraT -
NU950_RS11370 (1942083) 1942083..1945127 + 3045 WP_012783939.1 IncI1-type conjugal transfer protein TraU -
NU950_RS11375 (1945127) 1945127..1945741 + 615 WP_000337394.1 IncI1-type conjugal transfer protein TraV -
NU950_RS11380 (1945708) 1945708..1946910 + 1203 WP_012783938.1 IncI1-type conjugal transfer protein TraW -
NU950_RS11385 (1946939) 1946939..1947523 + 585 WP_012783937.1 conjugal transfer protein TraX -
NU950_RS11390 (1947620) 1947620..1949788 + 2169 WP_015508354.1 DotA/TraY family protein -
NU950_RS11395 (1949859) 1949859..1950521 + 663 WP_012783935.1 plasmid IncI1-type surface exclusion protein ExcA -
NU950_RS11400 (1950593) 1950593..1950802 - 210 WP_000062603.1 HEAT repeat domain-containing protein -
NU950_RS11405 (1951194) 1951194..1951370 + 177 WP_001054900.1 hypothetical protein -
NU950_RS11410 (1951435) 1951435..1951731 - 297 WP_011264046.1 DinQ-like type I toxin DqlB -
NU950_RS11415 (1951975) 1951975..1952943 + 969 WP_000654811.1 IS5 family transposase IS903B Transposase
NU950_RS11420 (1953096) 1953096..1953347 + 252 WP_001291964.1 hypothetical protein -
NU950_RS11425 (1953419) 1953419..1953571 - 153 WP_001387489.1 Hok/Gef family protein -
NU950_RS11430 (1953892) 1953892..1954977 + 1086 WP_000080543.1 protein finQ -
NU950_RS11435 (1955284) 1955284..1956492 + 1209 WP_001703845.1 IncI1-type conjugal transfer protein TrbA -
NU950_RS11440 (1956511) 1956511..1957581 + 1071 WP_012783932.1 IncI1-type conjugal transfer protein TrbB -
NU950_RS11445 (1957574) 1957574..1959865 + 2292 WP_012783931.1 F-type conjugative transfer protein TrbC -
NU950_RS11450 (1959902) 1959902..1962601 - 2700 WP_012783930.1 IncI1-type relaxase NikB -
NU950_RS11455 (1962612) 1962612..1962944 - 333 WP_001283947.1 IncI1-type relaxosome accessory protein NikA -
NU950_RS11460 (1963178) 1963178..1963513 + 336 WP_000157082.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
NU950_RS11465 (1963599) 1963599..1964447 - 849 WP_012783929.1 DUF4942 domain-containing protein -
NU950_RS11470 (1965027) 1965027..1965278 + 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
NU950_RS11475 (1965309) 1965309..1965515 - 207 WP_000150314.1 hypothetical protein VF
NU950_RS11480 (1965577) 1965577..1966479 - 903 WP_023150544.1 ISNCY family transposase ISRor2 VF
NU950_RS11485 (1966476) 1966476..1966865 - 390 WP_000833767.1 hypothetical protein -
NU950_RS11490 (1967042) 1967042..1967308 - 267 WP_000804663.1 hypothetical protein -
NU950_RS11495 (1967402) 1967402..1967836 - 435 WP_000218858.1 hypothetical protein -
NU950_RS11500 (1968565) 1968565..1969065 - 501 WP_000117626.1 antirestriction protein ArdA -
NU950_RS11505 (1969527) 1969527..1970123 - 597 WP_000977995.1 hypothetical protein -
NU950_RS11510 (1970120) 1970120..1970839 - 720 WP_012783927.1 plasmid SOS inhibition protein A -
NU950_RS11515 (1970836) 1970836..1971270 - 435 WP_001402001.1 conjugation system SOS inhibitor PsiB -
NU950_RS11520 (1971323) 1971323..1973281 - 1959 WP_063267868.1 ParB/RepB/Spo0J family partition protein -
NU950_RS11525 (1973340) 1973340..1973573 - 234 WP_015508350.1 DUF905 domain-containing protein -
NU950_RS11530 (1973631) 1973631..1974158 - 528 WP_012783926.1 single-stranded DNA-binding protein -
NU950_RS11535 (1975339) 1975339..1977006 + 1668 WP_258383338.1 group II intron reverse transcriptase/maturase -
NU950_RS11540 (1977285) 1977285..1977476 - 192 WP_001027516.1 hypothetical protein -
NU950_RS11545 (1977473) 1977473..1977895 - 423 WP_000271703.1 DUF1380 family protein -
NU950_RS11550 (1977942) 1977942..1978367 - 426 WP_001198889.1 antirestriction protein -
NU950_RS11555 (1978780) 1978780..1979550 - 771 WP_012783922.1 hypothetical protein -
NU950_RS11560 (1979595) 1979595..1980113 - 519 WP_223350510.1 DUF1380 family protein -
NU950_RS11565 (1980043) 1980043..1980264 - 222 WP_001104873.1 hypothetical protein -
NU950_RS11570 (1980265) 1980265..1980948 - 684 WP_000086127.1 DNA methylase -
NU950_RS11575 (1981024) 1981024..1981335 - 312 WP_033863049.1 hypothetical protein -
NU950_RS11580 (1981339) 1981339..1981761 - 423 WP_000774832.1 plasmid partitioning/stability family protein -
NU950_RS11585 (1981764) 1981764..1982744 - 981 WP_012783921.1 plasmid segregation protein ParM -
NU950_RS11590 (1983082) 1983082..1983417 + 336 WP_001340323.1 hypothetical protein -
NU950_RS11595 (1983422) 1983422..1983508 - 87 Protein_1892 hypothetical protein -
NU950_RS11600 (1983512) 1983512..1984414 - 903 WP_001739825.1 DUF1281 domain-containing protein -
NU950_RS11605 (1984832) 1984832..1985080 + 249 WP_000618110.1 DinI-like family protein -
NU950_RS11610 (1985077) 1985077..1985514 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NU950_RS11615 (1985514) 1985514..1986785 + 1272 WP_001703910.1 Y-family DNA polymerase -
NU950_RS11620 (1986981) 1986981..1987607 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
NU950_RS11625 (1987604) 1987604..1987906 + 303 WP_001245884.1 hypothetical protein -
NU950_RS11630 (1988437) 1988437..1989831 - 1395 WP_023150520.1 protein YagA -
NU950_RS11635 (1989774) 1989774..1990118 + 345 Protein_1900 WbuC family cupin fold metalloprotein -
NU950_RS11640 (1990165) 1990165..1991040 - 876 WP_015387340.1 Beta-lactamase CTX-M-1 ARG
NU950_RS11645 (1991309) 1991309..1992289 + 981 WP_072649545.1 IS5 family transposase ISKpn26 Transposase
NU950_RS11650 (1992496) 1992496..1993758 - 1263 WP_258383339.1 IS1380 family transposase ISEcp1 Transposase
NU950_RS11655 (1994179) 1994179..1994949 + 771 WP_029402187.1 threonine/serine exporter ThrE family protein -
NU950_RS11660 (1994940) 1994940..1995413 + 474 WP_000538188.1 threonine/serine exporter -
NU950_RS11665 (1995520) 1995520..1996059 + 540 WP_000098816.1 primosomal protein DnaT -
NU950_RS11670 (1996062) 1996062..1996799 + 738 WP_000799911.1 IS21 family transposase ISSme2 Transposase
NU950_RS11675 (1996848) 1996848..1997342 + 495 WP_001308243.1 DUF2501 domain-containing protein YjjA -
NU950_RS11680 (1997596) 1997596..1999887 + 2292 WP_001292653.1 phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase -
NU950_RS11685 (2000026) 2000026..2001048 - 1023 WP_000106030.1 L-galactonate oxidoreductase -
NU950_RS11690 (2001187) 2001187..2002101 + 915 WP_000091569.1 GntR family transcriptional regulator -
NU950_RS11695 (2002316) 2002316..2003677 + 1362 WP_000410129.1 MFS transporter -
NU950_RS11700 (2003726) 2003726..2005390 - 1665 WP_000919567.1 Methyl-accepting chemotaxis protein I VF
NU950_RS11705 (2005509) 2005509..2005955 - 447 WP_000543915.1 homoprotocatechuate degradation operon regulator HpaR -
NU950_RS11710 (2006227) 2006227..2007516 + 1290 WP_000679092.1 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase -
NU950_RS11715 (2007513) 2007513..2008979 + 1467 WP_000757512.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase -
NU950_RS11720 (2008981) 2008981..2009832 + 852 WP_000516990.1 3,4-dihydroxyphenylacetate 2,3-dioxygenase -
NU950_RS11725 (2009842) 2009842..2010222 + 381 WP_001119864.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase -
NU950_RS11730 (2010333) 2010333..2011136 + 804 WP_000459750.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase -
NU950_RS11735 (2011147) 2011147..2011935 + 789 WP_000431705.1 4-hydroxy-2-oxoheptanedioate aldolase -
NU950_RS11740 (2012110) 2012110..2013486 + 1377 WP_001285769.1 4-hydroxyphenylacetate permease -
NU950_RS11745 (2013496) 2013496..2014386 + 891 WP_000332891.1 4-hydroxyphenylacetate catabolism regulatory protein HpaA -
NU950_RS11750 (2014637) 2014637..2016199 + 1563 WP_029402184.1 4-hydroxyphenylacetate 3-monooxygenase oxygenase component VF
NU950_RS11755 (2016217) 2016217..2016729 + 513 WP_001175455.1 4-hydroxyphenylacetate 3-monooxygenase reductase subunit -
NU950_RS11760 (2017119) 2017119..2019269 + 2151 WP_001298933.1 pyruvate/proton symporter BtsT -
NU950_RS11765 (2019400) 2019400..2019603 + 204 WP_000467859.1 YbdD/YjiX family protein -
NU950_RS11770 (2019614) 2019614..2020570 + 957 WP_001295525.1 GTPase -
NU950_RS11775 (2020604) 2020604..2020906 - 303 WP_019842999.1 BrnA antitoxin family protein Antitoxin Detail
NU950_RS11780 (2020893) 2020893..2021180 - 288 WP_001131965.1 BrnT family toxin Toxin Detail
NU950_RS11785 (2021377) 2021377..2022543 + 1167 WP_000800825.1 restriction endonuclease -
NU950_RS11790 (2022607) 2022607..2024226 + 1620 WP_001029743.1 class I SAM-dependent DNA methyltransferase -
NU950_RS11795 (2024216) 2024216..2025640 + 1425 WP_000535015.1 restriction endonuclease subunit S -
NU950_RS11800 (2025735) 2025735..2028998 + 3264 WP_000058885.1 HsdR family type I site-specific deoxyribonuclease -
NU950_RS11805 (2029213) 2029213..2029551 + 339 WP_000132624.1 endoribonuclease SymE -
NU950_RS11810 (2029639) 2029639..2029791 - 153 WP_229018381.1 cytoplasmic protein -
NU950_RS11815 (2029934) 2029934..2031346 + 1413 WP_000199313.1 PLP-dependent aminotransferase family protein -
NU950_RS11820 (2031589) 2031589..2032533 - 945 WP_000181173.1 ISNCY family transposase ISRor2 VF
NU950_RS11825 (2033001) 2033001..2034233 + 1233 WP_001137015.1 multidrug efflux MFS transporter MdtM -
NU950_RS11830 (2034274) 2034274..2035554 + 1281 WP_001037392.1 DUF445 domain-containing protein -
NU950_RS11835 (2035670) 2035670..2036821 + 1152 WP_001307557.1 double-cubane-cluster-containing anaerobic reductase -
NU950_RS11840 (2036831) 2036831..2037598 + 768 WP_000222495.1 putative 2-hydroxyacyl-CoA dehydratase activator YjiL -
NU950_RS11845 (2037595) 2037595..2037852 + 258 WP_000657676.1 DUF3343 domain-containing protein -
NU950_RS11850 (2037917) 2037917..2038777 + 861 WP_001298932.1 YjiK family protein -
NU950_RS11855 (2038845) 2038845..2040023 + 1179 WP_001141192.1 MFS transporter -
NU950_RS11860 (2040036) 2040036..2040590 - 555 WP_001151854.1 RNA 2'-phosphotransferase -
NU950_RS11865 (2040840) 2040840..2041523 + 684 WP_072649507.1 nucleoside recognition domain-containing protein -
NU950_RS11870 (2041520) 2041520..2041981 + 462 WP_000211971.1 YjiG family protein -
NU950_RS11875 (2041994) 2041994..2043166 + 1173 WP_000568406.1 beta-aspartyl-peptidase -
NU950_RS11880 (2043231) 2043231..2044142 + 912 WP_000340764.1 hypochlorite stress DNA-binding transcriptional regulator HypT -
NU950_RS11885 (2044135) 2044135..2044527 - 393 WP_000986215.1 anti-adapter protein IraD -
NU950_RS11890 (2044524) 2044524..2044607 - 84 WP_120795393.1 iraD leader peptide IdlP -
NU950_RS11895 (2045200) 2045200..2046030 + 831 WP_000062558.1 DUF2686 family protein -
NU950_RS11900 (2046171) 2046171..2046944 - 774 WP_000833679.1 Uxu operon transcriptional regulator -
NU950_RS11905 (2047159) 2047159..2048619 - 1461 WP_029402182.1 fructuronate reductase -
NU950_RS11910 (2048700) 2048700..2049884 - 1185 WP_000438591.1 mannonate dehydratase -
NU950_RS11915 (2050224) 2050224..2051567 + 1344 WP_000558251.1 gluconate permease GntP -
NU950_RS11920 (2051810) 2051810..2052712 - 903 WP_000832227.1 Type 1 fimbrin D-mannose specific adhesin VF
NU950_RS11925 (2052732) 2052732..2053235 - 504 WP_000870592.1 Protein FimG VF
NU950_RS11930 (2053248) 2053248..2053778 - 531 WP_042630973.1 Protein FimF VF
NU950_RS11935 (2053788) 2053788..2056424 - 2637 WP_000120942.1 Outer membrane usher protein FimD VF
NU950_RS11940 (2056491) 2056491..2057216 - 726 WP_000066540.1 Chaperone protein FimC VF
NU950_RS11945 (2057253) 2057253..2057792 - 540 WP_000824109.1 putative major fimbrial subunit LpfA VF
NU950_RS11950 (2057857) 2057857..2058405 - 549 WP_000695561.1 Type-1 fimbrial protein, A chain VF
NU950_RS11955 (2058886) 2058886..2059482 - 597 WP_000044711.1 ISKra4 family transposase ISCep1 VF
NU950_RS11960 (2059960) 2059960..2060562 - 603 WP_000790583.1 ISKra4 family transposase ISCep1 VF
NU950_RS11965 (2062016) 2062016..2062732 + 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
NU950_RS11970 (2062752) 2062752..2063858 + 1107 WP_001295733.1 N-acetylneuraminate epimerase -
NU950_RS11975 (2063922) 2063922..2064902 + 981 WP_000991462.1 sialate O-acetylesterase -
NU950_RS11980 (2065012) 2065012..2065217 + 206 Protein_1969 HNH endonuclease -
NU950_RS11985 (2065485) 2065485..2066711 - 1227 Protein_1970 helicase YjhR -
NU950_RS11990 (2066843) 2066843..2067088 + 246 WP_001420158.1 GNAT family N-acetyltransferase -
NU950_RS11995 (2067465) 2067465..2067722 + 258 WP_001054379.1 YjhX family toxin -
NU950_RS12000 (2067734) 2067734..2068281 + 548 Protein_1973 N-acetyltransferase -
NU950_RS12005 (2068337) 2068337..2069083 + 747 WP_000354249.1 class I SAM-dependent methyltransferase -
NU950_RS12010 (2069253) 2069253..2069471 + 219 WP_001348444.1 hypothetical protein -
NU950_RS12015 (2069509) 2069509..2069625 + 117 Protein_1976 VOC family protein -
NU950_RS12020 (2069870) 2069870..2070991 + 1122 WP_000010833.1 M42 family metallopeptidase -
NU950_RS12025 (2070988) 2070988..2071266 + 279 WP_000722973.1 PTS sugar transporter subunit IIB SgcB -
NU950_RS12030 (2071278) 2071278..2072591 + 1314 WP_029402181.1 PTS sugar transporter subunit IIC SgcC -
NU950_RS12035 (2072604) 2072604..2073410 + 807 WP_000118626.1 BtpA family protein SgcQ -
NU950_RS12040 (2073541) 2073541..2073972 + 432 WP_000606405.1 SgcA family PTS sugar transporter subunit IIA -
NU950_RS12045 (2073984) 2073984..2074616 + 633 WP_000600624.1 ribulose-phosphate 3 epimerase family protein -
NU950_RS12050 (2074633) 2074633..2075415 + 783 WP_000082779.1 DeoR/GlpR family DNA-binding transcription regulator -
NU950_RS12055 (2075718) 2075718..2076506 + 789 WP_000251800.1 IclR family transcriptional regulator -
NU950_RS12060 (2076511) 2076511..2077416 + 906 WP_000714563.1 dihydrodipicolinate synthase family protein -
NU950_RS12065 (2077427) 2077427..2079394 + 1968 WP_000116325.1 xylonate dehydratase YjhG -
NU950_RS12070 (2079501) 2079501..2080850 + 1350 WP_001128363.1 GntP family permease -
NU950_RS12075 (2081197) 2081197..2082183 + 987 WP_000373366.1 sugar-binding transcriptional regulator -
NU950_RS12080 (2082224) 2082224..2083228 - 1005 WP_000471144.1 GRP family sugar transporter -
NU950_RS12085 (2083332) 2083332..2083973 - 642 WP_000439686.1 L-fuculose-phosphate aldolase -
NU950_RS12090 (2084004) 2084004..2085119 - 1116 WP_001022015.1 S-methyl-5-thioribose-1-phosphate isomerase -
NU950_RS12095 (2085129) 2085129..2086388 - 1260 WP_000132325.1 S-methyl-5-thioribose kinase -
NU950_RS12100 (2087188) 2087188..2088125 + 938 Protein_1993 glycosyltransferase -
NU950_RS12105 (2088546) 2088546..2090621 + 2076 WP_000366620.1 AAA family ATPase -
NU950_RS12110 (2090614) 2090614..2091900 + 1287 WP_000504875.1 McrC family protein -
NU950_RS12115 (2092010) 2092010..2093746 + 1737 WP_042630974.1 Alw26I/Eco31I/Esp3I family type II restriction endonuclease -
NU950_RS12120 (2093759) 2093759..2094949 - 1191 WP_001295727.1 DNA (cytosine-5-)-methyltransferase -
NU950_RS12125 (2094942) 2094942..2096564 - 1623 WP_001295726.1 Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase -
NU950_RS12130 (2097034) 2097034..2098575 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
NU950_RS12135 (2099169) 2099169..2099345 - 177 Protein_2000 IS3 family transposase ISSen1 Transposase
NU950_RS12140 (2099712) 2099712..2099861 - 150 Protein_2001 hypothetical protein -
NU950_RS12145 (2099967) 2099967..2100143 - 177 WP_000839286.1 DUF957 domain-containing protein -
NU950_RS12150 (2100160) 2100160..2100648 - 489 WP_000761690.1 DUF5983 family protein -
NU950_RS12155 (2100645) 2100645..2101022 - 378 WP_000854759.1 TA system toxin CbtA family protein Toxin Detail
NU950_RS12160 (2101112) 2101112..2101480 - 369 WP_001295723.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
NU950_RS12165 (2101643) 2101643..2101864 - 222 WP_000692345.1 DUF987 domain-containing protein -
NU950_RS12170 (2101927) 2101927..2102403 - 477 WP_001186775.1 RadC family protein -
NU950_RS12175 (2102419) 2102419..2102892 - 474 WP_000855059.1 antirestriction protein -
NU950_RS12180 (2103232) 2103232..2104050 - 819 WP_042631095.1 DUF932 domain-containing protein -
NU950_RS12185 (2104168) 2104168..2104363 - 196 Protein_2010 DUF905 family protein -
NU950_RS12190 (2104434) 2104434..2104652 - 219 WP_072649508.1 autotransporter domain-containing protein -
NU950_RS12195 (2104709) 2104709..2105731 + 1023 WP_000255946.1 IS21 family transposase IS100kyp Transposase
NU950_RS12200 (2105728) 2105728..2106510 + 783 WP_001317493.1 IS21-like element IS100kyp family helper ATPase IstB -
NU950_RS12205 (2106576) 2106576..2107430 - 855 Protein_2014 autotransporter adhesin family protein -
NU950_RS12210 (2108466) 2108466..2109068 - 603 WP_000813435.1 hypothetical protein -
NU950_RS12215 (2109164) 2109164..2109370 - 207 WP_000211308.1 helix-turn-helix domain-containing protein -
NU950_RS12220 (2110144) 2110144..2110293 + 150 WP_071526287.1 Hha/YmoA family nucleoid-associated regulatory protein -
NU950_RS12225 (2110626) 2110626..2110823 - 198 WP_001547002.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance