MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62280 bp
Accession: NZ_CP102672 Location: 1..62280 Organism: Escherichia coli strain XH987 Replicon: plasmid pXH987-MCR
Accession: NZ_CP102672 Location: 1..62280 Organism: Escherichia coli strain XH987 Replicon: plasmid pXH987-MCR
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NU950_RS00010 (NU950_00010) | 259..795 | + | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| NU950_RS00015 (NU950_00015) | 788..2431 | + | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| NU950_RS00020 (NU950_00020) | 2482..3792 | + | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| NU950_RS00025 (NU950_00025) | 3776..4270 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| NU950_RS00030 (NU950_00030) | 4295..5833 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| NU950_RS00035 (NU950_00035) | 5824..6810 | + | 987 | WP_168999710.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NU950_RS00040 (NU950_00040) | 6899..8127 | + | 1229 | WP_166738926.1 | IS3 family transposase IS2 | Transposase |
| NU950_RS00045 (NU950_00045) | 8319..8882 | + | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| NU950_RS00050 (NU950_00050) | 8948..9430 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| NU950_RS00055 (NU950_00055) | 9434..10069 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NU950_RS00060 (NU950_00060) | 10082..11356 | + | 1275 | WP_235883108.1 | hypothetical protein | VF |
| NU950_RS00065 (NU950_00065) | 13084..14208 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| NU950_RS00070 (NU950_00070) | 14220..14873 | + | 654 | WP_170855322.1 | hypothetical protein | - |
| NU950_RS00075 (NU950_00075) | 14903..15435 | + | 533 | Protein_14 | thermonuclease family protein | - |
| NU950_RS00080 (NU950_00080) | 15530..17206 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| NU950_RS00085 (NU950_00085) | 17376..17951 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| NU950_RS00090 (NU950_00090) | 17956..20121 | + | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| NU950_RS00095 (NU950_00095) | 20190..20396 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| NU950_RS00100 (NU950_00100) | 20742..21182 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| NU950_RS00105 (NU950_00105) | 21141..21914 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| NU950_RS00110 (NU950_00110) | 21986..23611 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| NU950_RS00115 (NU950_00115) | 23832..28145 | - | 4314 | WP_034169409.1 | hypothetical protein | - |
| NU950_RS00120 (NU950_00120) | 28142..28483 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| NU950_RS00125 (NU950_00125) | 28851..29252 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| NU950_RS00130 (NU950_00130) | 29270..30022 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| NU950_RS00135 (NU950_00135) | 30024..30731 | + | 708 | WP_000108794.1 | hypothetical protein | - |
| NU950_RS00140 (NU950_00140) | 30751..30891 | + | 141 | Protein_27 | hypothetical protein | - |
| NU950_RS00145 (NU950_00145) | 30868..31191 | + | 324 | WP_223666488.1 | hypothetical protein | - |
| NU950_RS00150 (NU950_00150) | 31193..31519 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| NU950_RS00155 (NU950_00155) | 31779..32078 | - | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NU950_RS00160 (NU950_00160) | 32319..32762 | + | 444 | WP_023223351.1 | hypothetical protein | - |
| NU950_RS00165 (NU950_00165) | 32850..33197 | - | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NU950_RS00170 (NU950_00170) | 33194..33442 | - | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NU950_RS00175 (NU950_00175) | 33931..34224 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| NU950_RS00180 (NU950_00180) | 34795..35037 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| NU950_RS00185 (NU950_00185) | 35034..35288 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| NU950_RS00190 (NU950_00190) | 35285..35827 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| NU950_RS00195 (NU950_00195) | 35931..36446 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| NU950_RS00200 (NU950_00200) | 36847..37176 | - | 330 | WP_001542022.1 | hypothetical protein | - |
| NU950_RS00205 (NU950_00205) | 37765..38430 | + | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| NU950_RS00210 (NU950_00210) | 38504..38788 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| NU950_RS00215 (NU950_00215) | 38806..39402 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| NU950_RS00220 (NU950_00220) | 39552..39671 | - | 120 | WP_229002406.1 | Hok/Gef family protein | - |
| NU950_RS00225 (NU950_00225) | 39619..39771 | - | 153 | Protein_44 | FlmC family protein | - |
| NU950_RS00230 (NU950_00230) | 40421..40611 | - | 191 | Protein_45 | hypothetical protein | - |
| NU950_RS00235 (NU950_00235) | 41312..42340 | - | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| NU950_RS00240 (NU950_00240) | 43472..43924 | + | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| NU950_RS00245 (NU950_00245) | 43917..44132 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| NU950_RS00250 (NU950_00250) | 44125..44301 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| NU950_RS00255 (NU950_00255) | 44328..45281 | + | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| NU950_RS00260 (NU950_00260) | 45655..46098 | + | 444 | WP_000964330.1 | NfeD family protein | - |
| NU950_RS00265 (NU950_00265) | 46102..46272 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| NU950_RS00270 (NU950_00270) | 46283..46729 | + | 447 | WP_001243165.1 | hypothetical protein | - |
| NU950_RS00275 (NU950_00275) | 46762..47019 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| NU950_RS00280 (NU950_00280) | 47000..47302 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| NU950_RS00285 (NU950_00285) | 47299..47556 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| NU950_RS00290 (NU950_00290) | 47560..48555 | + | 996 | WP_001028540.1 | hypothetical protein | VF |
| NU950_RS00295 (NU950_00295) | 48561..49205 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| NU950_RS00300 (NU950_00300) | 49214..49438 | + | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| NU950_RS00305 (NU950_00305) | 49661..50470 | - | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| NU950_RS00310 (NU950_00310) | 50518..50817 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NU950_RS00315 (NU950_00315) | 50820..52055 | + | 1236 | WP_034169417.1 | hypothetical protein | VF |
| NU950_RS00320 (NU950_00320) | 52061..52498 | + | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| NU950_RS00325 (NU950_00325) | 52617..53015 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| NU950_RS00330 (NU950_00330) | 53036..53620 | + | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| NU950_RS00335 (NU950_00335) | 53620..53910 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| NU950_RS00340 (NU950_00340) | 53981..54301 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| NU950_RS00345 (NU950_00345) | 54307..56664 | + | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| NU950_RS00350 (NU950_00350) | 56696..56830 | + | 135 | WP_000701233.1 | hypothetical protein | - |
| NU950_RS00355 (NU950_00355) | 56830..57564 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| NU950_RS00360 (NU950_00360) | 57561..58331 | + | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| NU950_RS00365 (NU950_00365) | 58321..59460 | + | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| NU950_RS00370 (NU950_00370) | 59479..60534 | + | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|