MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP102669 Location: 990087..1000513 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP102669 Location: 990087..1000513 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUW86_RS04710 (985200) | 985200..985580 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NUW86_RS04715 (985636) | 985636..988203 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NUW86_RS04720 (988362) | 988362..988883 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NUW86_RS04725 (989055) | 989055..989711 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NUW86_RS04730 (990058) | 990058..990263 | + | 206 | Protein_927 | IS5 family transposase ISEcl3 | Transposase |
| NUW86_RS04735 (990336) | 990336..990863 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NUW86_RS04740 (990860) | 990860..991150 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NUW86_RS04745 (991420) | 991420..991598 | - | 179 | Protein_930 | IS3 family transposase | - |
| NUW86_RS04750 (991839) | 991839..992165 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NUW86_RS04755 (992438) | 992438..992785 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NUW86_RS04760 (992770) | 992770..993219 | - | 450 | WP_000381610.1 | membrane protein | - |
| NUW86_RS04765 (993650) | 993650..994093 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NUW86_RS04770 (994550) | 994550..995200 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NUW86_RS04775 (995197) | 995197..996885 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NUW86_RS04780 (996882) | 996882..998000 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NUW86_RS04785 (998025) | 998025..1000082 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NUW86_RS04790 (1000106) | 1000106..1000513 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NUW86_RS04795 (1000510) | 1000510..1001805 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NUW86_RS04800 (1001783) | 1001783..1002226 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NUW86_RS04805 (1002226) | 1002226..1003236 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NUW86_RS04810 (1003236) | 1003236..1004147 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NUW86_RS04815 (1004137) | 1004137..1004811 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NUW86_RS04820 (1004837) | 1004837..1005097 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |