MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80740 bp
Accession: NZ_CP102503 Location: 1..80740 Organism: Citrobacter youngae strain CF10 Replicon: plasmid pCF10-C
Accession: NZ_CP102503 Location: 1..80740 Organism: Citrobacter youngae strain CF10 Replicon: plasmid pCF10-C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUG39_RS25845 (NUG39_25845) | 60..545 | - | 486 | WP_045337432.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NUG39_RS25850 (NUG39_25850) | 533..799 | - | 267 | WP_045334712.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NUG39_RS25855 (NUG39_25855) | 1453..2466 | + | 1014 | WP_045337434.1 | plasmid replication initiator RepA | - |
| NUG39_RS25860 (NUG39_25860) | 3346..4152 | + | 807 | WP_045337436.1 | DUF4225 domain-containing protein | - |
| NUG39_RS25865 (NUG39_25865) | 4127..4453 | - | 327 | WP_045337438.1 | hypothetical protein | - |
| NUG39_RS25870 (NUG39_25870) | 4585..5355 | - | 771 | WP_045337440.1 | TraX family protein | - |
| NUG39_RS25875 (NUG39_25875) | 5700..6200 | - | 501 | WP_045337442.1 | hypothetical protein | - |
| NUG39_RS25880 (NUG39_25880) | 6213..6707 | - | 495 | WP_032656049.1 | thermonuclease family protein | - |
| NUG39_RS25885 (NUG39_25885) | 6803..7771 | - | 969 | WP_072193960.1 | IS5 family transposase IS903 | Transposase |
| NUG39_RS25890 (NUG39_25890) | 7964..8875 | + | 912 | WP_032192052.1 | acetamidase/formamidase family protein | - |
| NUG39_RS25895 (NUG39_25895) | 8872..10215 | + | 1344 | WP_032192047.1 | APC family permease | - |
| NUG39_RS25900 (NUG39_25900) | 11537..12637 | + | 1101 | WP_032192045.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| NUG39_RS25905 (NUG39_25905) | 12725..12970 | - | 246 | WP_045337411.1 | hypothetical protein | - |
| NUG39_RS25910 (NUG39_25910) | 13006..13422 | - | 417 | WP_065889659.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NUG39_RS25915 (NUG39_25915) | 13419..13649 | - | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NUG39_RS25920 (NUG39_25920) | 14223..14573 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| NUG39_RS25930 (NUG39_25930) | 15417..15734 | + | 318 | WP_047345246.1 | DUF305 domain-containing protein | - |
| NUG39_RS25935 (NUG39_25935) | 16130..17110 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| NUG39_RS25940 (NUG39_25940) | 17322..18230 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| NUG39_RS25945 (NUG39_25945) | 18638..19606 | + | 969 | WP_074173274.1 | IS5 family transposase IS903B | Transposase |
| NUG39_RS25950 (NUG39_25950) | 19672..19958 | + | 287 | Protein_21 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NUG39_RS25955 (NUG39_25955) | 20327..21067 | + | 741 | WP_045337421.1 | site-specific integrase | - |
| NUG39_RS25960 (NUG39_25960) | 21764..22774 | - | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| NUG39_RS25965 (NUG39_25965) | 23515..24681 | + | 1167 | WP_000523812.1 | hypothetical protein | VF |
| NUG39_RS25970 (NUG39_25970) | 24681..25652 | + | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NUG39_RS25975 (NUG39_25975) | 26471..26608 | - | 138 | WP_223861923.1 | hypothetical protein | - |
| NUG39_RS25980 (NUG39_25980) | 26733..27602 | - | 870 | WP_256064015.1 | IS5 family transposase IS903B | Transposase |
| NUG39_RS25985 (NUG39_25985) | 27734..27907 | + | 174 | Protein_28 | IS6 family transposase IS15DI | Transposase |
| NUG39_RS25990 (NUG39_25990) | 27960..28369 | - | 410 | Protein_29 | IS1 family transposase IS1X4 | Transposase |
| NUG39_RS25995 (NUG39_25995) | 28411..28938 | + | 528 | WP_071845418.1 | extracellular solute-binding protein | - |
| NUG39_RS26000 (NUG39_26000) | 28962..29486 | + | 525 | WP_003032103.1 | L-2-amino-thiazoline-4-carboxylic acid hydrolase | - |
| NUG39_RS26005 (NUG39_26005) | 29483..29731 | + | 249 | Protein_32 | VOC family protein | - |
| NUG39_RS26010 (NUG39_26010) | 29867..31894 | + | 2028 | WP_045358028.1 | class I SAM-dependent DNA methyltransferase | - |
| NUG39_RS26015 (NUG39_26015) | 31891..32154 | + | 264 | WP_257749369.1 | hypothetical protein | - |
| NUG39_RS26020 (NUG39_26020) | 32466..33452 | + | 987 | WP_000211824.1 | hypothetical protein | - |
| NUG39_RS26025 (NUG39_26025) | 33449..35488 | + | 2040 | WP_101740169.1 | ATP-dependent helicase | - |
| NUG39_RS26030 (NUG39_26030) | 35491..35745 | - | 255 | WP_000880375.1 | hypothetical protein | - |
| NUG39_RS26035 (NUG39_26035) | 35871..36105 | - | 235 | Protein_38 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| NUG39_RS26040 (NUG39_26040) | 36435..37307 | + | 873 | WP_257749370.1 | restriction endonuclease subunit S | - |
| NUG39_RS26045 (NUG39_26045) | 37308..40565 | + | 3258 | WP_045337254.1 | DEAD/DEAH box helicase family protein | - |
| NUG39_RS26050 (NUG39_26050) | 40570..41838 | + | 1269 | WP_045337256.1 | ISL3 family transposase ISKpn25 | Transposase |
| NUG39_RS26055 (NUG39_26055) | 41979..42497 | + | 519 | Protein_42 | VOC family protein | - |
| NUG39_RS26060 (NUG39_26060) | 42598..43362 | - | 765 | WP_032451558.1 | GntR family transcriptional regulator | - |
| NUG39_RS26065 (NUG39_26065) | 43588..44373 | + | 786 | WP_003032097.1 | ABC transporter substrate-binding protein | - |
| NUG39_RS26070 (NUG39_26070) | 44378..45352 | + | 975 | WP_003032095.1 | SIS domain-containing protein | - |
| NUG39_RS26075 (NUG39_26075) | 45365..46177 | + | 813 | WP_003032093.1 | PfkB family carbohydrate kinase | - |
| NUG39_RS26080 (NUG39_26080) | 46569..47266 | + | 698 | WP_223861918.1 | IS1 family transposase | - |
| NUG39_RS26085 (NUG39_26085) | 47284..47670 | - | 387 | Protein_48 | IS3 family transposase ISEc52 | Transposase |
| NUG39_RS26090 (NUG39_26090) | 47751..48317 | - | 567 | Protein_49 | group II intron maturase-specific domain-containing protein | - |
| NUG39_RS26095 (NUG39_26095) | 48319..48480 | + | 162 | Protein_50 | hypothetical protein | - |
| NUG39_RS26100 (NUG39_26100) | 48477..49475 | + | 999 | WP_045620794.1 | conjugal transfer pilus assembly protein TraU | - |
| NUG39_RS26105 (NUG39_26105) | 49486..50109 | + | 624 | WP_015572106.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NUG39_RS26110 (NUG39_26110) | 50106..51941 | + | 1836 | WP_045620795.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NUG39_RS26115 (NUG39_26115) | 51938..52720 | + | 783 | WP_032656081.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NUG39_RS26120 (NUG39_26120) | 52730..53197 | + | 468 | WP_045620796.1 | hypothetical protein | - |
| NUG39_RS26125 (NUG39_26125) | 53194..53412 | + | 219 | WP_045620797.1 | hypothetical protein | - |
| NUG39_RS26130 (NUG39_26130) | 53402..54013 | + | 612 | WP_045620798.1 | F-type conjugal transfer protein TrbB | - |
| NUG39_RS26135 (NUG39_26135) | 54031..54294 | + | 264 | WP_045620799.1 | hypothetical protein | - |
| NUG39_RS26140 (NUG39_26140) | 54291..54707 | + | 417 | WP_045620800.1 | hypothetical protein | - |
| NUG39_RS26145 (NUG39_26145) | 54700..56064 | + | 1365 | WP_047723329.1 | conjugal transfer pilus assembly protein TraH | - |
| NUG39_RS26150 (NUG39_26150) | 56064..59468 | + | 3405 | WP_045620802.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NUG39_RS26155 (NUG39_26155) | 59470..60159 | + | 690 | WP_045620803.1 | hypothetical protein | - |
| NUG39_RS26160 (NUG39_26160) | 60308..61039 | + | 732 | WP_045620804.1 | conjugal transfer complement resistance protein TraT | - |
| NUG39_RS26165 (NUG39_26165) | 61231..61542 | + | 312 | WP_045620805.1 | hypothetical protein | - |
| NUG39_RS26170 (NUG39_26170) | 61659..64250 | + | 2592 | WP_045620555.1 | type IV conjugative transfer system coupling protein TraD | - |
| NUG39_RS26175 (NUG39_26175) | 64247..69748 | + | 5502 | WP_257749364.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NUG39_RS26180 (NUG39_26180) | 69776..70564 | + | 789 | WP_045337326.1 | DsbA family protein | - |
| NUG39_RS26185 (NUG39_26185) | 70722..70949 | + | 228 | WP_045334731.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NUG39_RS26190 (NUG39_26190) | 70976..71311 | + | 336 | WP_045334728.1 | hypothetical protein | - |
| NUG39_RS26195 (NUG39_26195) | 71497..71712 | - | 216 | Protein_70 | transposase | - |
| NUG39_RS26200 (NUG39_26200) | 71990..72994 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| NUG39_RS26205 (NUG39_26205) | 73073..73630 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NUG39_RS26210 (NUG39_26210) | 73624..73995 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| NUG39_RS26215 (NUG39_26215) | 73992..74492 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| NUG39_RS26220 (NUG39_26220) | 74489..74815 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| NUG39_RS26225 (NUG39_26225) | 75070..75426 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| NUG39_RS26230 (NUG39_26230) | 75416..75817 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| NUG39_RS26235 (NUG39_26235) | 75814..76104 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| NUG39_RS26240 (NUG39_26240) | 76410..77423 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NUG39_RS26245 (NUG39_26245) | 77630..78031 | + | 402 | WP_106672696.1 | NUDIX domain-containing protein | - |
| NUG39_RS26250 (NUG39_26250) | 78096..78776 | + | 681 | WP_106672694.1 | pyrimidine 5'-nucleotidase | - |
| NUG39_RS26255 (NUG39_26255) | 78876..80225 | - | 1350 | WP_044067521.1 | group II intron reverse transcriptase/maturase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|