MGE detailed information
MGE type: IScluster/Tn MGE length: 8245 bp
Accession: NZ_CP102502 Location: 40668..48912 Organism: Citrobacter youngae strain CF10 Replicon: plasmid pCF10-NDM
Accession: NZ_CP102502 Location: 40668..48912 Organism: Citrobacter youngae strain CF10 Replicon: plasmid pCF10-NDM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUG39_RS25270 (NUG39_25270) | 37363..37581 | + | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NUG39_RS25275 (NUG39_25275) | 37583..37888 | + | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NUG39_RS25280 (NUG39_25280) | 37890..38204 | + | 315 | WP_008322211.1 | hypothetical protein | - |
| NUG39_RS25285 (NUG39_25285) | 38194..38985 | + | 792 | WP_008322208.1 | site-specific integrase | - |
| NUG39_RS25290 (NUG39_25290) | 39184..40524 | - | 1341 | Protein_40 | GntP family transporter | - |
| NUG39_RS25295 (NUG39_25295) | 40668..41414 | - | 747 | Protein_41 | IS5 family transposase IS5D | Transposase |
| NUG39_RS25305 (NUG39_25305) | 42635..42751 | - | 117 | Protein_43 | IS5 family transposase IS5B | Transposase |
| NUG39_RS25310 (NUG39_25310) | 43269..44008 | + | 740 | Protein_44 | site-specific integrase | - |
| NUG39_RS25315 (NUG39_25315) | 44304..45293 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| NUG39_RS25320 (NUG39_25320) | 46149..46418 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NUG39_RS25325 (NUG39_25325) | 46422..46952 | + | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NUG39_RS25330 (NUG39_25330) | 47120..48100 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| NUG39_RS25335 (NUG39_25335) | 48247..48993 | - | 747 | Protein_49 | IS3 family transposase ISEhe3 | Transposase |
| NUG39_RS25340 (NUG39_25340) | 49006..49125 | - | 120 | Protein_50 | IS30 family transposase | - |
| NUG39_RS25345 (NUG39_25345) | 49380..49562 | - | 183 | WP_016479964.1 | hypothetical protein | - |
| NUG39_RS25350 (NUG39_25350) | 49751..51391 | - | 1641 | WP_004201176.1 | chaperonin GroEL | - |
| NUG39_RS25355 (NUG39_25355) | 51447..51737 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| NUG39_RS25360 (NUG39_25360) | 51931..52260 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| NUG39_RS25365 (NUG39_25365) | 52265..52639 | + | 375 | Protein_55 | protein-disulfide reductase DsbD family protein | - |
| NUG39_RS25370 (NUG39_25370) | 52739..53296 | + | 558 | Protein_56 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|