MGE detailed information
MGE type: Genomic_island MGE length: 10445 bp
Accession: NZ_CP101940 Location: 4145338..4155782 Organism: Salmonella enterica subsp. enterica strain QA-1986 974 Replicon: chromosome
Accession: NZ_CP101940 Location: 4145338..4155782 Organism: Salmonella enterica subsp. enterica strain QA-1986 974 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP448_RS20345 (4141807) | 4141807..4142205 | + | 399 | Protein_3962 | cytoplasmic protein | - |
| NP448_RS20350 (4142396) | 4142396..4142635 | + | 240 | Protein_3963 | hypothetical protein | - |
| NP448_RS20355 (4142792) | 4142792..4143460 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| NP448_RS20360 (4143487) | 4143487..4143981 | + | 495 | WP_000424947.1 | hypothetical protein | - |
| NP448_RS20365 (4144226) | 4144226..4144882 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NP448_RS20370 (4145112) | 4145112..4145532 | + | 421 | Protein_3967 | IS5 family transposase | - |
| NP448_RS20375 (4145605) | 4145605..4146132 | - | 528 | WP_058653211.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NP448_RS20380 (4146129) | 4146129..4146419 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NP448_RS20385 (4146689) | 4146689..4146867 | - | 179 | Protein_3970 | IS3 family transposase | - |
| NP448_RS20390 (4147108) | 4147108..4147434 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NP448_RS20395 (4147707) | 4147707..4148054 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NP448_RS20400 (4148039) | 4148039..4148488 | - | 450 | WP_000381617.1 | hypothetical protein | - |
| NP448_RS20405 (4148920) | 4148920..4149363 | - | 444 | WP_001522905.1 | Type 3 secretion system pilotin | VF |
| NP448_RS20410 (4149819) | 4149819..4150469 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NP448_RS20415 (4150466) | 4150466..4152154 | + | 1689 | WP_058653210.1 | Type 3 secretion system secretin | VF |
| NP448_RS20420 (4152151) | 4152151..4153269 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NP448_RS20425 (4153294) | 4153294..4155351 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| NP448_RS20430 (4155375) | 4155375..4155782 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NP448_RS20435 (4155779) | 4155779..4157074 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NP448_RS20440 (4157052) | 4157052..4157495 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NP448_RS20445 (4157495) | 4157495..4158505 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| NP448_RS20450 (4158505) | 4158505..4159416 | + | 912 | WP_000058730.1 | SPI-1 type III secretion system protein SpaO | - |
| NP448_RS20455 (4159406) | 4159406..4160080 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NP448_RS20460 (4160106) | 4160106..4160366 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.006 |