MGE detailed information
MGE type: Genomic_island MGE length: 10488 bp
Accession: NZ_CP101925 Location: 4033068..4043555 Organism: Escherichia coli strain Seattle 1946 Replicon: chromosome
Accession: NZ_CP101925 Location: 4033068..4043555 Organism: Escherichia coli strain Seattle 1946 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP429_RS19440 (4029043) | 4029043..4029495 | + | 453 | WP_000682723.1 | hypothetical protein | - |
| NP429_RS19445 (4029613) | 4029613..4029846 | + | 234 | WP_001213776.1 | DUF905 family protein | - |
| NP429_RS19450 (4029946) | 4029946..4030767 | + | 822 | WP_001234359.1 | DUF932 domain-containing protein | - |
| NP429_RS19455 (4030767) | 4030767..4031012 | + | 246 | WP_001164966.1 | hypothetical protein | - |
| NP429_RS19460 (4031106) | 4031106..4031579 | + | 474 | WP_001313575.1 | antirestriction protein | - |
| NP429_RS19465 (4031595) | 4031595..4032071 | + | 477 | WP_001313574.1 | RadC family protein | - |
| NP429_RS19470 (4032134) | 4032134..4032355 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| NP429_RS19475 (4032374) | 4032374..4033018 | + | 645 | WP_000086761.1 | hypothetical protein | - |
| NP429_RS19480 (4033068) | 4033068..4033442 | + | 375 | WP_001285481.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NP429_RS19485 (4033489) | 4033489..4033866 | + | 378 | WP_000854730.1 | TA system toxin CbtA family protein | Toxin Detail |
| NP429_RS19490 (4033863) | 4033863..4034355 | + | 493 | Protein_3824 | DUF5983 family protein | - |
| NP429_RS19495 (4034434) | 4034434..4035422 | - | 989 | Protein_3825 | IS630 family transposase IS630 | Transposase |
| NP429_RS19500 (4035570) | 4035570..4035758 | - | 189 | Protein_3826 | IS66 family transposase | - |
| NP429_RS19505 (4035819) | 4035819..4036952 | + | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| NP429_RS19510 (4037206) | 4037206..4038610 | - | 1405 | Protein_3828 | IS66 family transposase ISEc47 | Transposase |
| NP429_RS19515 (4038641) | 4038641..4038991 | - | 351 | WP_000624707.1 | IS66 family transposase IS682 | Transposase |
| NP429_RS19520 (4038988) | 4038988..4039279 | - | 292 | Protein_3830 | IS66 family transposase ISEc43 | Transposase |
| NP429_RS19525 (4039321) | 4039321..4039515 | + | 195 | WP_001313570.1 | DUF957 domain-containing protein | - |
| NP429_RS19530 (4039597) | 4039597..4040454 | + | 858 | Protein_3832 | DUF4942 domain-containing protein | - |
| NP429_RS19540 (4040784) | 4040784..4041515 | - | 732 | WP_001308374.1 | DNA polymerase III subunit epsilon | - |
| NP429_RS19545 (4041580) | 4041580..4042047 | + | 468 | WP_000917878.1 | ribonuclease HI | - |
| NP429_RS19550 (4042044) | 4042044..4042766 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| NP429_RS19555 (4042800) | 4042800..4043555 | + | 756 | WP_001052735.1 | hydroxyacylglutathione hydrolase | - |
| NP429_RS19560 (4043627) | 4043627..4044985 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| NP429_RS19565 (4045034) | 4045034..4045804 | - | 771 | WP_000211716.1 | class I SAM-dependent methyltransferase | - |
| NP429_RS19570 (4045882) | 4045882..4046682 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NP429_RS19575 (4046923) | 4046923..4047837 | + | 915 | WP_000648563.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA47027 | NZ_CP007799 | 243683..255832 | 0.007 |