MGE detailed information
MGE type: Genomic_island MGE length: 9478 bp
Accession: NZ_CP101915 Location: 4194904..4204381 Organism: Escherichia coli strain Evo1 Replicon: chromosome
Accession: NZ_CP101915 Location: 4194904..4204381 Organism: Escherichia coli strain Evo1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP443_RS20425 (4190832) | 4190832..4191170 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| NP443_RS20430 (4191146) | 4191146..4192843 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| NP443_RS20435 (4192880) | 4192880..4193455 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| NP443_RS20445 (4194254) | 4194254..4194847 | + | 594 | Protein_3995 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NP443_RS20450 (4194904) | 4194904..4195601 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| NP443_RS20455 (4195616) | 4195616..4196569 | + | 954 | Protein_3997 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NP443_RS20460 (4196934) | 4196934..4198268 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NP443_RS20465 (4198348) | 4198348..4200495 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| NP443_RS20470 (4200554) | 4200554..4202011 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| NP443_RS20475 (4202248) | 4202248..4203765 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| NP443_RS20480 (4203884) | 4203884..4204057 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NP443_RS20485 (4204085) | 4204085..4204381 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NP443_RS20490 (4204608) | 4204608..4204880 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| NP443_RS20495 (4204892) | 4204892..4205122 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NP443_RS20500 (4205303) | 4205303..4206934 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| NP443_RS20505 (4206931) | 4206931..4207650 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.003 |