MGE detailed information
MGE type: Genomic_island MGE length: 10445 bp
Accession: NZ_CP101907 Location: 4111189..4121633 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Accession: NZ_CP101907 Location: 4111189..4121633 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP441_RS20130 (4107658) | 4107658..4108056 | + | 399 | Protein_3919 | cytoplasmic protein | - |
| NP441_RS20135 (4108247) | 4108247..4108486 | + | 240 | Protein_3920 | hypothetical protein | - |
| NP441_RS20140 (4108643) | 4108643..4109311 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| NP441_RS20145 (4109338) | 4109338..4109832 | + | 495 | WP_000424947.1 | hypothetical protein | - |
| NP441_RS20150 (4110077) | 4110077..4110733 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NP441_RS20155 (4110963) | 4110963..4111383 | + | 421 | Protein_3924 | IS5 family transposase | - |
| NP441_RS20160 (4111456) | 4111456..4111983 | - | 528 | WP_058653211.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NP441_RS20165 (4111980) | 4111980..4112270 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NP441_RS20170 (4112540) | 4112540..4112718 | - | 179 | Protein_3927 | IS3 family transposase | - |
| NP441_RS20175 (4112959) | 4112959..4113285 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NP441_RS20180 (4113558) | 4113558..4113905 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NP441_RS20185 (4113890) | 4113890..4114339 | - | 450 | WP_000381617.1 | hypothetical protein | - |
| NP441_RS20190 (4114771) | 4114771..4115214 | - | 444 | WP_001522905.1 | Type 3 secretion system pilotin | VF |
| NP441_RS20195 (4115670) | 4115670..4116320 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NP441_RS20200 (4116317) | 4116317..4118005 | + | 1689 | WP_058653210.1 | Type 3 secretion system secretin | VF |
| NP441_RS20205 (4118002) | 4118002..4119120 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NP441_RS20210 (4119145) | 4119145..4121202 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| NP441_RS20215 (4121226) | 4121226..4121633 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NP441_RS20220 (4121630) | 4121630..4122925 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NP441_RS20225 (4122903) | 4122903..4123346 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NP441_RS20230 (4123346) | 4123346..4124356 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| NP441_RS20235 (4124356) | 4124356..4125267 | + | 912 | WP_000058730.1 | SPI-1 type III secretion system protein SpaO | - |
| NP441_RS20240 (4125257) | 4125257..4125931 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NP441_RS20245 (4125957) | 4125957..4126217 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.006 |