MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33309 bp
Accession: NZ_CP101861 Location: 1..33309 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-MCR1
Accession: NZ_CP101861 Location: 1..33309 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-MCR1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS24630 (NPX80_24635) | 213..1331 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| NPX80_RS24635 (NPX80_24640) | 1333..2361 | + | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| NPX80_RS24640 (NPX80_24645) | 2348..4210 | + | 1863 | WP_170324155.1 | relaxosome-coupling protein TaxB | - |
| NPX80_RS24645 (NPX80_24650) | 4219..4641 | + | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| NPX80_RS24650 (NPX80_24655) | 4625..4930 | + | 306 | WP_001350475.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NPX80_RS24655 (NPX80_24660) | 5043..5237 | + | 195 | Protein_6 | ATP-binding protein | - |
| NPX80_RS24660 (NPX80_24665) | 5241..5813 | + | 573 | WP_001198960.1 | hypothetical protein | - |
| NPX80_RS24665 (NPX80_24670) | 5818..7971 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| NPX80_RS24670 (NPX80_24675) | 7968..8174 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| NPX80_RS24675 (NPX80_24680) | 8192..8656 | + | 465 | WP_001293134.1 | H-NS family nucleoid-associated regulatory protein | - |
| NPX80_RS24680 (NPX80_24685) | 8743..9447 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NPX80_RS24685 (NPX80_24690) | 10988..11635 | + | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| NPX80_RS24690 (NPX80_24695) | 11710..11979 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| NPX80_RS24695 (NPX80_24700) | 12140..12769 | + | 630 | WP_223424520.1 | DUF2806 domain-containing protein | - |
| NPX80_RS24700 (NPX80_24705) | 12943..14568 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| NPX80_RS24705 (NPX80_24710) | 14640..15362 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| NPX80_RS24710 (NPX80_24715) | 15753..16280 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| NPX80_RS24715 (NPX80_24720) | 16415..16819 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| NPX80_RS24720 (NPX80_24725) | 16832..17698 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| NPX80_RS24725 (NPX80_24730) | 19113..19628 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| NPX80_RS24730 (NPX80_24735) | 19733..20275 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| NPX80_RS24735 (NPX80_24740) | 20272..20523 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| NPX80_RS24740 (NPX80_24745) | 20510..20737 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| NPX80_RS24745 (NPX80_24750) | 21191..21490 | + | 300 | WP_256500690.1 | hypothetical protein | - |
| NPX80_RS24750 (NPX80_24755) | 21581..21931 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| NPX80_RS24755 (NPX80_24760) | 22236..22484 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NPX80_RS24760 (NPX80_24765) | 22481..22828 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NPX80_RS24765 (NPX80_24770) | 23189..23692 | + | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| NPX80_RS24770 (NPX80_24775) | 23696..24925 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| NPX80_RS24775 (NPX80_24780) | 25002..25295 | + | 294 | WP_060598542.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| NPX80_RS24780 (NPX80_24785) | 25292..25507 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| NPX80_RS24785 (NPX80_24790) | 25863..26483 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| NPX80_RS24790 (NPX80_24795) | 26497..26823 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| NPX80_RS24795 (NPX80_24800) | 26842..29589 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| NPX80_RS24800 (NPX80_24805) | 29601..30317 | + | 717 | WP_000832283.1 | type IV secretion system protein | - |
| NPX80_RS24805 (NPX80_24810) | 30329..31423 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| NPX80_RS24810 (NPX80_24815) | 31938..32624 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|