MGE detailed information
MGE type: Mobilizable plasmid MGE length: 87554 bp
Accession: NZ_CP101860 Location: 1..87554 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-87kb
Accession: NZ_CP101860 Location: 1..87554 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-87kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS24130 (NPX80_24135) | 1..1029 | + | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| NPX80_RS24135 (NPX80_24140) | 1730..1930 | + | 201 | WP_256482531.1 | hypothetical protein | - |
| NPX80_RS24140 (NPX80_24145) | 1966..2219 | + | 254 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NPX80_RS24145 (NPX80_24150) | 2200..2481 | + | 282 | WP_256504029.1 | helix-turn-helix transcriptional regulator | - |
| NPX80_RS24150 (NPX80_24155) | 2501..2656 | + | 156 | Protein_4 | plasmid stabilization protein | - |
| NPX80_RS24155 (NPX80_24160) | 2803..4032 | + | 1230 | WP_256482785.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NPX80_RS24160 (NPX80_24165) | 4016..7426 | + | 3411 | WP_256637687.1 | putative autotransporter | VF |
| NPX80_RS24165 (NPX80_24170) | 7515..7700 | + | 186 | WP_256637688.1 | helix-turn-helix transcriptional regulator | - |
| NPX80_RS24170 (NPX80_24175) | 7720..7875 | + | 156 | Protein_8 | plasmid stabilization protein | - |
| NPX80_RS24175 (NPX80_24180) | 8022..9251 | + | 1230 | WP_256482785.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NPX80_RS24180 (NPX80_24185) | 9235..12648 | + | 3414 | WP_256637690.1 | putative autotransporter | VF |
| NPX80_RS24185 (NPX80_24190) | 12737..12922 | + | 186 | WP_256637688.1 | helix-turn-helix transcriptional regulator | - |
| NPX80_RS24190 (NPX80_24195) | 12942..13097 | + | 156 | Protein_12 | plasmid stabilization protein | - |
| NPX80_RS24195 (NPX80_24200) | 13244..14473 | + | 1230 | WP_256482785.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NPX80_RS24200 (NPX80_24205) | 14457..17867 | + | 3411 | WP_256637691.1 | putative autotransporter | VF |
| NPX80_RS24205 (NPX80_24210) | 17956..18141 | + | 186 | WP_256637688.1 | helix-turn-helix transcriptional regulator | - |
| NPX80_RS24210 (NPX80_24215) | 18161..18316 | + | 156 | Protein_16 | plasmid stabilization protein | - |
| NPX80_RS24215 (NPX80_24220) | 18463..19692 | + | 1230 | WP_256482785.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NPX80_RS24220 (NPX80_24225) | 19676..23080 | + | 3405 | WP_256637693.1 | putative autotransporter | VF |
| NPX80_RS24225 (NPX80_24230) | 23169..23354 | + | 186 | WP_256637688.1 | helix-turn-helix transcriptional regulator | - |
| NPX80_RS24230 (NPX80_24235) | 23374..23529 | + | 156 | Protein_20 | plasmid stabilization protein | - |
| NPX80_RS24235 (NPX80_24240) | 23676..24905 | + | 1230 | WP_256482785.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| NPX80_RS24240 (NPX80_24245) | 24889..28299 | + | 3411 | WP_256637694.1 | putative autotransporter | VF |
| NPX80_RS24245 (NPX80_24250) | 28572..28955 | - | 384 | Protein_23 | IS91 family transposase ISSbo1 | Transposase |
| NPX80_RS24250 (NPX80_24255) | 29420..29767 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| NPX80_RS24255 (NPX80_24260) | 29817..31352 | + | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| NPX80_RS24260 (NPX80_24265) | 31395..32216 | - | 822 | Protein_26 | IS91 family transposase IS1294 | Transposase |
| NPX80_RS24265 (NPX80_24270) | 32226..32414 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| NPX80_RS24270 (NPX80_24275) | 32528..32728 | - | 201 | Protein_28 | IS200-IS605 family transposase IS609 | Transposase |
| NPX80_RS24275 (NPX80_24280) | 32736..33944 | + | 1209 | WP_072859362.1 | IS200-IS605 family transposase IS609 | Transposase |
| NPX80_RS24280 (NPX80_24285) | 34144..34296 | + | 153 | Protein_30 | FlmC family protein | - |
| NPX80_RS24285 (NPX80_24290) | 34244..34363 | + | 120 | WP_228932012.1 | Hok/Gef family protein | - |
| NPX80_RS24290 (NPX80_24295) | 34513..35109 | + | 597 | WP_256482669.1 | ProQ/FINO family protein | - |
| NPX80_RS24295 (NPX80_24300) | 35127..35411 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| NPX80_RS24300 (NPX80_24305) | 35485..36150 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| NPX80_RS24305 (NPX80_24310) | 36747..37076 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| NPX80_RS24310 (NPX80_24315) | 37657..37797 | + | 141 | WP_256637695.1 | hypothetical protein | - |
| NPX80_RS24315 (NPX80_24320) | 37956..39065 | - | 1110 | Protein_37 | IS4 family transposase IS186A | Transposase |
| NPX80_RS24320 (NPX80_24325) | 39150..39359 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| NPX80_RS24325 (NPX80_24330) | 39456..39680 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| NPX80_RS24330 (NPX80_24335) | 39732..39992 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| NPX80_RS24335 (NPX80_24340) | 39982..40233 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| NPX80_RS24340 (NPX80_24345) | 40783..41061 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| NPX80_RS24345 (NPX80_24350) | 41481..41747 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NPX80_RS24350 (NPX80_24355) | 41854..42297 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| NPX80_RS24355 (NPX80_24360) | 42594..42776 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| NPX80_RS24360 (NPX80_24365) | 42801..43238 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NPX80_RS24365 (NPX80_24370) | 43369..43695 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| NPX80_RS24370 (NPX80_24375) | 43715..44422 | - | 708 | WP_256482667.1 | hypothetical protein | - |
| NPX80_RS24375 (NPX80_24380) | 44424..45176 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| NPX80_RS24380 (NPX80_24385) | 45194..45595 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| NPX80_RS24385 (NPX80_24390) | 45963..46304 | + | 342 | WP_063084543.1 | hypothetical protein | Relaxase |
| NPX80_RS24390 (NPX80_24395) | 46301..50089 | + | 3789 | WP_256482666.1 | relaxase | - |
| NPX80_RS24395 (NPX80_24400) | 50132..50572 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| NPX80_RS24400 (NPX80_24405) | 50918..51124 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| NPX80_RS24405 (NPX80_24410) | 51193..53358 | - | 2166 | WP_052947447.1 | type IA DNA topoisomerase | - |
| NPX80_RS24410 (NPX80_24415) | 53363..53938 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| NPX80_RS24415 (NPX80_24420) | 54108..55784 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| NPX80_RS24420 (NPX80_24425) | 55879..56394 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| NPX80_RS24425 (NPX80_24430) | 57144..58430 | - | 1287 | WP_015057162.1 | hypothetical protein | VF |
| NPX80_RS24430 (NPX80_24435) | 58443..59078 | - | 636 | WP_000934979.1 | hypothetical protein | VF |
| NPX80_RS24435 (NPX80_24440) | 59082..59564 | - | 483 | WP_256482524.1 | hypothetical protein | VF |
| NPX80_RS24440 (NPX80_24445) | 59630..60187 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| NPX80_RS24445 (NPX80_24450) | 60232..61341 | - | 1110 | WP_000974903.1 | hypothetical protein | VF |
| NPX80_RS24450 (NPX80_24455) | 61332..62870 | - | 1539 | WP_000466225.1 | hypothetical protein | VF |
| NPX80_RS24455 (NPX80_24460) | 62895..63389 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| NPX80_RS24460 (NPX80_24465) | 63373..64683 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| NPX80_RS24465 (NPX80_24470) | 64734..66377 | - | 1644 | WP_001035589.1 | Type 3 secretion system secretin | VF |
| NPX80_RS24470 (NPX80_24475) | 66370..66894 | - | 525 | WP_001401691.1 | sigma 54-interacting transcriptional regulator | - |
| NPX80_RS24475 (NPX80_24480) | 66941..68899 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NPX80_RS24480 (NPX80_24485) | 68915..69970 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| NPX80_RS24485 (NPX80_24490) | 69989..71128 | - | 1140 | WP_000790640.1 | hypothetical protein | VF |
| NPX80_RS24490 (NPX80_24495) | 71118..71888 | - | 771 | WP_000979242.1 | hypothetical protein | VF |
| NPX80_RS24495 (NPX80_24500) | 71885..72619 | - | 735 | WP_256482529.1 | Type IV secretion system protein virB8 | VF |
| NPX80_RS24500 (NPX80_24505) | 72785..75142 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| NPX80_RS24505 (NPX80_24510) | 75148..75468 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| NPX80_RS24510 (NPX80_24515) | 75539..75829 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| NPX80_RS24515 (NPX80_24520) | 75829..76413 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| NPX80_RS24520 (NPX80_24525) | 76434..76832 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| NPX80_RS24525 (NPX80_24530) | 76951..77388 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| NPX80_RS24530 (NPX80_24535) | 77394..78629 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| NPX80_RS24535 (NPX80_24540) | 78632..78931 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NPX80_RS24540 (NPX80_24545) | 78999..79280 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NPX80_RS24545 (NPX80_24550) | 79270..79521 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| NPX80_RS24550 (NPX80_24555) | 79621..80256 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| NPX80_RS24555 (NPX80_24560) | 80329..80616 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| NPX80_RS24560 (NPX80_24565) | 80629..80883 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| NPX80_RS24565 (NPX80_24570) | 80885..81526 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| NPX80_RS24570 (NPX80_24575) | 81532..82527 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| NPX80_RS24575 (NPX80_24580) | 82531..82788 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| NPX80_RS24580 (NPX80_24585) | 82785..83087 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| NPX80_RS24585 (NPX80_24590) | 83068..83325 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| NPX80_RS24590 (NPX80_24595) | 83358..83804 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| NPX80_RS24595 (NPX80_24600) | 83815..83985 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| NPX80_RS24600 (NPX80_24605) | 83989..84432 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| NPX80_RS24605 (NPX80_24610) | 84806..85759 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| NPX80_RS24610 (NPX80_24615) | 85786..85962 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| NPX80_RS24615 (NPX80_24620) | 85955..86170 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| NPX80_RS24620 (NPX80_24625) | 86191..86415 | - | 225 | WP_256482530.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|