MGE detailed information
MGE type: Mobilizable plasmid MGE length: 101973 bp
Accession: NZ_CP101859 Location: 1..101973 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-101kb
Accession: NZ_CP101859 Location: 1..101973 Organism: Escherichia coli strain LP50-1 Replicon: plasmid pLP50-1-101kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS23485 (1) | 1..858 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| NPX80_RS23490 (1797) | 1797..2279 | + | 483 | WP_228252671.1 | histidine phosphatase family protein | - |
| NPX80_RS23495 (2261) | 2261..2452 | + | 192 | WP_001376180.1 | CPBP family glutamic-type intramembrane protease | - |
| NPX80_RS23500 (2545) | 2545..2802 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NPX80_RS23505 (2735) | 2735..3136 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NPX80_RS23510 (3385) | 3385..3800 | + | 416 | Protein_6 | IS1 family transposase IS1R | Transposase |
| NPX80_RS23515 (3836) | 3836..4381 | - | 546 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NPX80_RS23520 (4447) | 4447..5151 | - | 705 | WP_256637685.1 | IS6 family transposase IS26 | Transposase |
| NPX80_RS23525 (5221) | 5221..5412 | + | 192 | Protein_9 | IS1380 family transposase | - |
| NPX80_RS23530 (5662) | 5662..6537 | + | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| NPX80_RS23535 (6572) | 6572..7540 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| NPX80_RS23540 (7597) | 7597..8694 | + | 1098 | Protein_12 | TonB-dependent receptor | - |
| NPX80_RS23545 (8762) | 8762..9238 | - | 477 | Protein_13 | PAS domain-containing protein | - |
| NPX80_RS23550 (9291) | 9291..9991 | - | 701 | Protein_14 | IS6 family transposase | - |
| NPX80_RS23555 (10152) | 10152..10712 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| NPX80_RS23560 (10815) | 10815..11675 | - | 861 | WP_000704513.1 | Quorum-quenching protein AidA | VF |
| NPX80_RS23565 (11734) | 11734..12480 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| NPX80_RS23570 (12500) | 12500..13906 | - | 1407 | Protein_18 | Multifunctional conjugation protein TraI | Relaxase |
| NPX80_RS23575 (13983) | 13983..14165 | - | 183 | WP_256637686.1 | hypothetical protein | - |
| NPX80_RS23580 (14152) | 14152..14718 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NPX80_RS23585 (14740) | 14740..15051 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NPX80_RS23590 (15066) | 15066..15431 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| NPX80_RS23595 (15464) | 15464..15865 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| NPX80_RS23600 (15958) | 15958..16647 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| NPX80_RS23605 (16834) | 16834..17217 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPX80_RS23610 (17538) | 17538..18140 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| NPX80_RS23615 (18437) | 18437..19258 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| NPX80_RS23620 (19376) | 19376..19663 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NPX80_RS23625 (19688) | 19688..19894 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| NPX80_RS23630 (19964) | 19964..20136 | + | 173 | Protein_30 | hypothetical protein | - |
| NPX80_RS23635 (20134) | 20134..20364 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| NPX80_RS23640 (20584) | 20584..20709 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NPX80_RS23645 (20651) | 20651..20800 | - | 150 | Protein_33 | plasmid maintenance protein Mok | - |
| - (20786) | 20786..21010 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20786) | 20786..21010 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20786) | 20786..21010 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (20786) | 20786..21010 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| NPX80_RS23650 (20822) | 20822..21010 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NPX80_RS23655 (20979) | 20979..21741 | - | 763 | Protein_35 | plasmid SOS inhibition protein A | - |
| NPX80_RS23660 (21738) | 21738..22172 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| NPX80_RS23665 (22227) | 22227..22424 | - | 198 | Protein_37 | hypothetical protein | - |
| NPX80_RS23670 (22452) | 22452..22685 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| NPX80_RS23675 (22753) | 22753..23292 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| NPX80_RS23680 (23318) | 23318..23524 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| NPX80_RS23685 (23594) | 23594..23674 | + | 81 | Protein_41 | hypothetical protein | - |
| NPX80_RS23690 (23857) | 23857..24026 | - | 170 | Protein_42 | hypothetical protein | - |
| NPX80_RS23695 (24620) | 24620..25591 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NPX80_RS23700 (25591) | 25591..26757 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| NPX80_RS23710 (28239) | 28239..30440 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| NPX80_RS23715 (30466) | 30466..31799 | - | 1334 | Protein_47 | L-lysine N6-monooxygenase | VF |
| NPX80_RS23720 (31796) | 31796..33538 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| NPX80_RS23725 (33538) | 33538..34485 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| NPX80_RS23730 (34486) | 34486..36210 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| NPX80_RS23735 (36346) | 36346..37539 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| NPX80_RS23740 (37919) | 37919..38299 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| NPX80_RS23745 (38640) | 38640..39053 | - | 414 | Protein_53 | phosphopyruvate hydratase | - |
| NPX80_RS23750 (39051) | 39051..39308 | + | 258 | Protein_54 | transposase | - |
| NPX80_RS23755 (39542) | 39542..40399 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| NPX80_RS23760 (40396) | 40396..41253 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| NPX80_RS23765 (41250) | 41250..42077 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| NPX80_RS23770 (42077) | 42077..42991 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| NPX80_RS23775 (43347) | 43347..44044 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| NPX80_RS23780 (44224) | 44224..44726 | - | 503 | Protein_60 | DUF4113 domain-containing protein | - |
| NPX80_RS23785 (44795) | 44795..44899 | - | 105 | Protein_61 | AAA family ATPase | - |
| NPX80_RS23790 (44901) | 44901..45224 | - | 324 | Protein_62 | IS21 family transposase IS21 | Transposase |
| NPX80_RS23795 (45966) | 45966..46941 | + | 976 | Protein_63 | RepB family plasmid replication initiator protein | - |
| NPX80_RS23800 (47223) | 47223..47957 | - | 735 | Protein_64 | site-specific integrase | - |
| NPX80_RS23805 (48080) | 48080..48268 | - | 189 | WP_032146390.1 | hypothetical protein | - |
| NPX80_RS23810 (48642) | 48642..49543 | - | 902 | Protein_66 | antimicrobial resistance protein Mig-14 | - |
| NPX80_RS23815 (49611) | 49611..50721 | - | 1111 | Protein_67 | SDR family oxidoreductase | - |
| NPX80_RS23820 (51153) | 51153..52103 | - | 951 | Protein_68 | omptin family outer membrane protease | - |
| NPX80_RS23825 (53396) | 53396..53575 | - | 180 | Protein_69 | transposase | - |
| NPX80_RS23830 (53713) | 53713..54003 | + | 291 | Protein_70 | IS3 family transposase IS1203 | Transposase |
| NPX80_RS23835 (54071) | 54071..54766 | + | 696 | Protein_71 | IS1 family transposase IS1R | Transposase |
| NPX80_RS23840 (54760) | 54760..55041 | - | 282 | WP_072834405.1 | hypothetical protein | - |
| NPX80_RS23845 (55182) | 55182..57008 | - | 1827 | WP_001339650.1 | AAA family ATPase | - |
| NPX80_RS23850 (57011) | 57011..57496 | - | 486 | WP_001015823.1 | hypothetical protein | - |
| NPX80_RS23855 (57486) | 57486..58586 | - | 1101 | WP_072714138.1 | hypothetical protein | - |
| NPX80_RS23860 (59116) | 59116..59265 | - | 150 | Protein_76 | IS3 family transposase IS2 | Transposase |
| NPX80_RS23865 (59443) | 59443..60636 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| NPX80_RS23870 (61859) | 61859..63095 | - | 1237 | Protein_78 | IS3 family transposase IS2 | Transposase |
| NPX80_RS23875 (63722) | 63722..64015 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| NPX80_RS23880 (64073) | 64073..64272 | - | 200 | Protein_80 | lysis protein | - |
| NPX80_RS23885 (64479) | 64479..65183 | + | 705 | Protein_81 | IS6 family transposase IS15DI | Transposase |
| NPX80_RS23890 (65248) | 65248..65478 | + | 231 | Protein_82 | transposase family protein | - |
| NPX80_RS23895 (65487) | 65487..66347 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| NPX80_RS23900 (66379) | 66379..67578 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| NPX80_RS23905 (67684) | 67684..68310 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NPX80_RS23910 (68477) | 68477..69181 | - | 705 | Protein_86 | IS6 family transposase IS15DII | Transposase |
| NPX80_RS23915 (69246) | 69246..70509 | - | 1264 | Protein_87 | IS1182 family transposase ISCfr1 | Transposase |
| NPX80_RS23920 (70624) | 70624..71760 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| NPX80_RS23925 (71811) | 71811..72038 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| NPX80_RS23930 (72062) | 72062..72253 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| NPX80_RS23935 (72735) | 72735..73277 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| NPX80_RS23940 (73290) | 73290..74150 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| NPX80_RS23945 (74293) | 74293..75255 | + | 963 | Protein_93 | IS4 family transposase IS10R | Transposase |
| NPX80_RS23950 (75365) | 75365..75682 | + | 318 | Protein_94 | IS4 family transposase IS10R | Transposase |
| NPX80_RS23955 (75747) | 75747..76454 | + | 708 | WP_256637684.1 | IS6 family transposase IS15DI | Transposase |
| NPX80_RS23960 (76798) | 76798..77001 | - | 204 | Protein_96 | hypothetical protein | - |
| NPX80_RS23965 (77174) | 77174..77341 | + | 168 | Protein_97 | colicin-B | - |
| NPX80_RS23970 (77359) | 77359..77886 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| NPX80_RS23975 (78130) | 78130..78945 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| NPX80_RS23980 (78995) | 78995..79348 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NPX80_RS23985 (79526) | 79526..80317 | - | 792 | WP_097423166.1 | site-specific integrase | - |
| NPX80_RS23990 (80314) | 80314..81003 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| NPX80_RS23995 (81047) | 81047..81397 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| NPX80_RS24000 (81968) | 81968..82228 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| NPX80_RS24005 (82225) | 82225..82815 | + | 591 | WP_000194555.1 | hypothetical protein | - |
| NPX80_RS24010 (82833) | 82833..83180 | - | 348 | WP_000142424.1 | DUF6404 family protein | - |
| NPX80_RS24015 (83299) | 83299..83646 | + | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| NPX80_RS24020 (83664) | 83664..85544 | - | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NPX80_RS24025 (85823) | 85823..87169 | - | 1347 | WP_001132019.1 | protein YagA | - |
| NPX80_RS24030 (87523) | 87523..88125 | + | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| NPX80_RS24035 (88181) | 88181..88675 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| NPX80_RS24040 (88675) | 88675..88941 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| NPX80_RS24045 (89418) | 89418..89909 | - | 492 | WP_000068661.1 | hypothetical protein | - |
| NPX80_RS24050 (89843) | 89843..92809 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NPX80_RS24055 (92812) | 92812..93222 | - | 411 | Protein_115 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| NPX80_RS24060 (93286) | 93286..93990 | + | 705 | WP_073520228.1 | IS6 family transposase IS15DI | Transposase |
| NPX80_RS24065 (94042) | 94042..94200 | - | 159 | Protein_117 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| NPX80_RS24070 (94326) | 94326..94676 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| NPX80_RS24075 (94879) | 94879..95892 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NPX80_RS24080 (96050) | 96050..96523 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| NPX80_RS24085 (96654) | 96654..97442 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| NPX80_RS24090 (97729) | 97729..98433 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NPX80_RS24095 (98816) | 98816..99518 | + | 703 | Protein_123 | IS6 family transposase IS15DII | Transposase |
| NPX80_RS24100 (99617) | 99617..99829 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| NPX80_RS24105 (100075) | 100075..100149 | + | 75 | Protein_125 | endonuclease | - |
| - (100405) | 100405..100466 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (100405) | 100405..100466 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (100405) | 100405..100466 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (100405) | 100405..100466 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| NPX80_RS24110 (100510) | 100510..100659 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| NPX80_RS24115 (100943) | 100943..101200 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| NPX80_RS24120 (101217) | 101217..101468 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| NPX80_RS24125 (101459) | 101459..101506 | + | 48 | WP_229471593.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|