MGE detailed information
MGE type: Genomic_island MGE length: 10407 bp
Accession: NZ_CP101513 Location: 4195335..4205741 Organism: Escherichia coli strain HH194M Replicon: chromosome
Accession: NZ_CP101513 Location: 4195335..4205741 Organism: Escherichia coli strain HH194M Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOO21_RS20370 (4190774) | 4190774..4192075 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| MOO21_RS20375 (4192191) | 4192191..4192529 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| MOO21_RS20380 (4192505) | 4192505..4194202 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| MOO21_RS20385 (4194239) | 4194239..4194814 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| MOO21_RS20400 (4196390) | 4196390..4197928 | + | 1539 | WP_024218489.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MOO21_RS20405 (4198294) | 4198294..4199628 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MOO21_RS20410 (4199708) | 4199708..4201855 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| MOO21_RS20415 (4201914) | 4201914..4203371 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| MOO21_RS20420 (4203608) | 4203608..4205125 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| MOO21_RS20425 (4205244) | 4205244..4205417 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| MOO21_RS20430 (4205445) | 4205445..4205741 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| MOO21_RS20435 (4205968) | 4205968..4206240 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| MOO21_RS20440 (4206252) | 4206252..4206482 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| MOO21_RS20445 (4206663) | 4206663..4208294 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| MOO21_RS20450 (4208291) | 4208291..4209010 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |