MGE detailed information
MGE type: Genomic_island MGE length: 41798 bp
Accession: NZ_CP101417 Location: 1494518..1536315 Organism: Xanthomonas hortorum strain jj2001 Replicon: chromosome
Accession: NZ_CP101417 Location: 1494518..1536315 Organism: Xanthomonas hortorum strain jj2001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMB96_RS06270 (NMB96_06255) | 1489643..1493158 | + | 3516 | WP_255086509.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| NMB96_RS06275 (NMB96_06260) | 1493180..1493455 | + | 276 | Protein_1235 | integrase core domain-containing protein | - |
| NMB96_RS06280 (NMB96_06265) | 1493543..1494439 | + | 897 | WP_023905861.1 | hypothetical protein | - |
| NMB96_RS06285 (NMB96_06270) | 1494518..1495578 | + | 1061 | Protein_1237 | IS3 family transposase ISXcd1 | Transposase |
| NMB96_RS06290 (NMB96_06275) | 1495822..1496802 | - | 981 | WP_183086757.1 | IS5 family transposase IS1646 | Transposase |
| NMB96_RS06295 (NMB96_06280) | 1496841..1497416 | - | 576 | WP_183086756.1 | Tn3 family transposase ISPsy42 | Transposase |
| NMB96_RS06300 (NMB96_06285) | 1497597..1497848 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NMB96_RS06305 (NMB96_06290) | 1497845..1498240 | + | 396 | WP_009602864.1 | type II toxin-antitoxin system VapC family toxin | - |
| NMB96_RS06310 (NMB96_06295) | 1498375..1498947 | - | 573 | WP_255086510.1 | DUF6012 family protein | - |
| NMB96_RS06315 (NMB96_06300) | 1498972..1499247 | - | 276 | Protein_1243 | integrase core domain-containing protein | - |
| NMB96_RS06320 (NMB96_06305) | 1499269..1502919 | - | 3651 | WP_255086511.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| NMB96_RS06325 (NMB96_06310) | 1503253..1504233 | - | 981 | WP_183086757.1 | IS5 family transposase IS1646 | Transposase |
| NMB96_RS06330 (NMB96_06315) | 1504286..1505536 | - | 1251 | WP_043889786.1 | XopAP family type III secretion system effector | - |
| NMB96_RS06335 (NMB96_06320) | 1505601..1505885 | - | 285 | WP_104552355.1 | hypothetical protein | - |
| NMB96_RS06340 (NMB96_06325) | 1506648..1506929 | + | 282 | WP_023905806.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMB96_RS06345 (NMB96_06330) | 1506947..1507237 | + | 291 | WP_006449989.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| NMB96_RS06350 (NMB96_06335) | 1507420..1507610 | - | 191 | Protein_1250 | hypothetical protein | - |
| NMB96_RS06355 (NMB96_06340) | 1507764..1508096 | - | 333 | WP_183086954.1 | hypothetical protein | - |
| NMB96_RS06360 (NMB96_06345) | 1508653..1509060 | + | 408 | WP_104592032.1 | hypothetical protein | - |
| NMB96_RS06365 (NMB96_06350) | 1509095..1510249 | + | 1155 | WP_023905258.1 | hypothetical protein | - |
| NMB96_RS06370 (NMB96_06355) | 1510364..1510696 | - | 333 | WP_255086512.1 | hypothetical protein | - |
| NMB96_RS06375 (NMB96_06360) | 1510823..1511569 | - | 747 | WP_255086513.1 | RelA/SpoT domain-containing protein | - |
| NMB96_RS06380 (NMB96_06365) | 1511642..1512622 | - | 981 | WP_183086593.1 | IS5 family transposase IS1646 | Transposase |
| NMB96_RS06385 (NMB96_06370) | 1512723..1513727 | - | 1005 | WP_084217961.1 | AAA family ATPase | - |
| NMB96_RS06390 (NMB96_06375) | 1513789..1514625 | - | 837 | WP_255086514.1 | restriction endonuclease | - |
| NMB96_RS06395 (NMB96_06380) | 1514989..1515720 | + | 732 | Protein_1259 | pseudouridine synthase | - |
| NMB96_RS06400 (NMB96_06385) | 1515834..1516814 | - | 981 | WP_183086593.1 | IS5 family transposase IS1646 | Transposase |
| NMB96_RS06405 (NMB96_06390) | 1516875..1517048 | + | 174 | Protein_1261 | pseudouridylate synthase | - |
| NMB96_RS06410 (NMB96_06395) | 1517167..1517496 | + | 330 | WP_023905802.1 | hypothetical protein | - |
| NMB96_RS06415 (NMB96_06400) | 1517612..1517893 | + | 282 | Protein_1263 | hypothetical protein | - |
| NMB96_RS06420 (NMB96_06405) | 1517893..1518149 | - | 257 | Protein_1264 | integrase core domain-containing protein | - |
| NMB96_RS06425 (NMB96_06410) | 1518710..1520335 | + | 1626 | WP_183086948.1 | type III secretion system leucine-rich repeat domain-containing effector XopL | - |
| NMB96_RS06430 (NMB96_06415) | 1520476..1520697 | - | 222 | Protein_1266 | IS5 family transposase IS1646 | Transposase |
| NMB96_RS06435 (NMB96_06420) | 1520770..1521613 | + | 844 | Protein_1267 | IS5 family transposase ISXfu1 | Transposase |
| NMB96_RS06440 (NMB96_06425) | 1521736..1522587 | - | 852 | WP_255086515.1 | hypothetical protein | - |
| NMB96_RS06445 (NMB96_06430) | 1522700..1523155 | - | 456 | WP_255086516.1 | hypothetical protein | - |
| NMB96_RS06450 (NMB96_06435) | 1523458..1523859 | + | 402 | WP_255086517.1 | DUF2384 domain-containing protein | - |
| NMB96_RS06455 (NMB96_06440) | 1523942..1525567 | - | 1626 | WP_255086518.1 | alpha/beta hydrolase-fold protein | - |
| NMB96_RS06460 (NMB96_06445) | 1525933..1526115 | + | 183 | WP_006448384.1 | helix-turn-helix transcriptional regulator | - |
| NMB96_RS06465 (NMB96_06450) | 1526483..1526668 | + | 186 | Protein_1273 | hypothetical protein | - |
| NMB96_RS06470 (NMB96_06455) | 1526726..1527178 | + | 453 | WP_183086946.1 | hypothetical protein | - |
| NMB96_RS06475 (NMB96_06460) | 1527165..1527602 | - | 438 | WP_023905887.1 | DUF6393 family protein | - |
| NMB96_RS06480 (NMB96_06465) | 1527741..1527911 | + | 171 | WP_192824376.1 | hypothetical protein | - |
| NMB96_RS06485 (NMB96_06470) | 1528220..1528780 | + | 561 | WP_023905791.1 | hypothetical protein | - |
| NMB96_RS06490 (NMB96_06475) | 1528906..1529322 | - | 417 | WP_255086519.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NMB96_RS06495 (NMB96_06480) | 1529319..1529573 | - | 255 | WP_255086520.1 | Arc family DNA-binding protein | Antitoxin Detail |
| NMB96_RS06500 (NMB96_06485) | 1529713..1530825 | - | 1113 | WP_255086521.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NMB96_RS06505 (NMB96_06490) | 1530812..1531018 | - | 207 | WP_023905787.1 | hypothetical protein | - |
| NMB96_RS06510 (NMB96_06495) | 1531299..1531805 | + | 507 | WP_043889571.1 | hypothetical protein | - |
| NMB96_RS06515 (NMB96_06500) | 1531872..1533137 | - | 1266 | WP_023905785.1 | phospholipase D-like domain-containing protein | - |
| NMB96_RS06525 (NMB96_06510) | 1535302..1536315 | + | 1014 | WP_043889594.1 | hypothetical protein | - |
| NMB96_RS06530 (NMB96_06515) | 1536483..1537322 | - | 840 | WP_255086522.1 | SDR family oxidoreductase | - |
| NMB96_RS06535 (NMB96_06520) | 1537423..1538316 | + | 894 | WP_255086523.1 | LysR family transcriptional regulator | - |
| NMB96_RS06540 (NMB96_06525) | 1538569..1539930 | + | 1362 | WP_043889570.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|