MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP101390 Location: 2522707..2534792 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Accession: NZ_CP101390 Location: 2522707..2534792 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU39_RS12440 (2518628) | 2518628..2519830 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NMU39_RS12445 (2519843) | 2519843..2521294 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NMU39_RS12450 (2521438) | 2521438..2522445 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NMU39_RS12455 (2522704) | 2522704..2524170 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NMU39_RS12460 (2524978) | 2524978..2525692 | + | 715 | Protein_2439 | helix-turn-helix domain-containing protein | - |
| NMU39_RS12465 (2525748) | 2525748..2526656 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NMU39_RS12470 (2526799) | 2526799..2527131 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NMU39_RS12475 (2527121) | 2527121..2527336 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NMU39_RS12480 (2527488) | 2527488..2527736 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NMU39_RS12485 (2527726) | 2527726..2528010 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMU39_RS12490 (2528181) | 2528181..2528570 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NMU39_RS12495 (2528622) | 2528622..2529701 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NMU39_RS12500 (2529894) | 2529894..2530382 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NMU39_RS12505 (2530427) | 2530427..2531935 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NMU39_RS12510 (2531925) | 2531925..2533166 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NMU39_RS12515 (2533236) | 2533236..2534792 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NMU39_RS12520 (2534969) | 2534969..2536255 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NMU39_RS12525 (2536230) | 2536230..2537255 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NMU39_RS12530 (2537314) | 2537314..2538105 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NMU39_RS12535 (2538151) | 2538151..2539242 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |