MGE detailed information
MGE type: Prophage MGE length: 39729 bp
Accession: NZ_CP101390 Location: 2166364..2206092 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Accession: NZ_CP101390 Location: 2166364..2206092 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU39_RS10665 () | 2162557..2163453 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| NMU39_RS10670 () | 2163873..2164484 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NMU39_RS10675 () | 2164493..2165503 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NMU39_RS10680 () | 2165582..2166367 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| NMU39_RS10685 () | 2166364..2167119 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| NMU39_RS10690 () | 2167198..2168142 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NMU39_RS10695 () | 2168158..2169477 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NMU39_RS10700 () | 2169594..2170565 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NMU39_RS10705 () | 2170638..2172080 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NMU39_RS10710 () | 2172204..2173073 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NMU39_RS10715 () | 2173415..2174890 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NMU39_RS10720 () | 2175125..2176936 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NMU39_RS10725 () | 2176974..2177615 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NMU39_RS10730 () | 2177715..2178893 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMU39_RS10735 () | 2179024..2179314 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NMU39_RS10740 () | 2179382..2179735 | + | 354 | WP_001042119.1 | protein YebF | - |
| NMU39_RS10745 () | 2179829..2180488 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NMU39_RS10750 () | 2180701..2182752 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NMU39_RS10755 () | 2182787..2183485 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NMU39_RS10760 () | 2183509..2184165 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NMU39_RS10765 () | 2184273..2184503 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NMU39_RS10770 () | 2184641..2185015 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NMU39_RS10775 () | 2185016..2185891 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NMU39_RS10780 () | 2185908..2186261 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2186361..2186506 | - | 146 | - | - | Antitoxin Detail |
| - | 2186401..2186504 | + | 104 | - | - | Toxin Detail |
| NMU39_RS10785 () | 2186635..2187558 | - | 924 | Protein_2111 | hypothetical protein ; Integrase | Integrase |
| NMU39_RS10790 () | 2187822..2188283 | - | 462 | Protein_2112 | DNA breaking-rejoining protein | - |
| NMU39_RS10795 () | 2188272..2188463 | + | 192 | Protein_2113 | glycoside hydrolase family 19 protein | - |
| NMU39_RS10800 () | 2188517..2189050 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NMU39_RS10805 () | 2189307..2189474 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NMU39_RS10810 () | 2189539..2189727 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NMU39_RS10815 () | 2189782..2190042 | + | 261 | Protein_2117 | DUF1441 family protein | - |
| NMU39_RS10820 () | 2190257..2190601 | + | 345 | Protein_2118 | macro domain-containing protein | - |
| NMU39_RS10825 () | 2190611..2191081 | + | 471 | Protein_2119 | tail fiber assembly protein | - |
| NMU39_RS10830 () | 2191178..2191405 | - | 228 | WP_010989049.1 | PagK family vesicle-borne virulence factor | - |
| NMU39_RS10835 () | 2191768..2191948 | - | 181 | Protein_2121 | IS3 family transposase | - |
| NMU39_RS10840 () | 2191948..2192073 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| NMU39_RS10845 () | 2192662..2192894 | + | 233 | Protein_2123 | helix-turn-helix domain-containing protein | - |
| NMU39_RS10850 () | 2193221..2193835 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NMU39_RS10855 () | 2193845..2194003 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NMU39_RS10860 () | 2194136..2195050 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NMU39_RS10865 () | 2196363..2196785 | - | 423 | Protein_2127 | hypothetical protein ; Integrase | Integrase |
| NMU39_RS10870 () | 2196855..2198049 | + | 1195 | Protein_2128 | IS256 family transposase IS285 | Transposase |
| NMU39_RS10875 () | 2198195..2198335 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NMU39_RS10880 () | 2198501..2198770 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NMU39_RS10885 () | 2199140..2199559 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NMU39_RS10890 () | 2199947..2200423 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NMU39_RS10895 () | 2200753..2201148 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NMU39_RS10900 () | 2201831..2202553 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NMU39_RS10905 () | 2202838..2203002 | + | 165 | WP_001134856.1 | membrane protein | - |
| NMU39_RS10910 () | 2203226..2203876 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NMU39_RS10915 () | 2203895..2204086 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NMU39_RS10920 () | 2204197..2204433 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NMU39_RS10925 () | 2204551..2205990 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMU39_RS10930 () | 2206068..2208701 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| NMU39_RS10935 () | 2208670..2209953 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NMU39_RS10940 () | 2210082..2210579 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.005 |