MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP101390 Location: 1108473..1118899 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Accession: NZ_CP101390 Location: 1108473..1118899 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU39_RS05355 (1103586) | 1103586..1103966 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NMU39_RS05360 (1104022) | 1104022..1106589 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NMU39_RS05365 (1106748) | 1106748..1107269 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NMU39_RS05370 (1107441) | 1107441..1108097 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NMU39_RS05375 (1108444) | 1108444..1108649 | + | 206 | Protein_1056 | IS5 family transposase ISEcl3 | Transposase |
| NMU39_RS05380 (1108722) | 1108722..1109249 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NMU39_RS05385 (1109246) | 1109246..1109536 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NMU39_RS05390 (1109806) | 1109806..1109984 | - | 179 | Protein_1059 | IS3 family transposase | - |
| NMU39_RS05395 (1110225) | 1110225..1110551 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NMU39_RS05400 (1110824) | 1110824..1111171 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NMU39_RS05405 (1111156) | 1111156..1111605 | - | 450 | WP_000381610.1 | membrane protein | - |
| NMU39_RS05410 (1112036) | 1112036..1112479 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NMU39_RS05415 (1112936) | 1112936..1113586 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NMU39_RS05420 (1113583) | 1113583..1115271 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NMU39_RS05425 (1115268) | 1115268..1116386 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NMU39_RS05430 (1116411) | 1116411..1118468 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NMU39_RS05435 (1118492) | 1118492..1118899 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NMU39_RS05440 (1118896) | 1118896..1120191 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NMU39_RS05445 (1120169) | 1120169..1120612 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NMU39_RS05450 (1120612) | 1120612..1121622 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NMU39_RS05455 (1121622) | 1121622..1122533 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NMU39_RS05460 (1122523) | 1122523..1123197 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NMU39_RS05465 (1123223) | 1123223..1123483 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |