MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP101388 Location: 2466796..2478881 Organism: Salmonella enterica strain SC2017167 Replicon: chromosome
Accession: NZ_CP101388 Location: 2466796..2478881 Organism: Salmonella enterica strain SC2017167 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU38_RS12130 (2462717) | 2462717..2463919 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NMU38_RS12135 (2463932) | 2463932..2465383 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NMU38_RS12140 (2465527) | 2465527..2466534 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NMU38_RS12145 (2466793) | 2466793..2468259 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NMU38_RS12150 (2469067) | 2469067..2469781 | + | 715 | Protein_2377 | helix-turn-helix domain-containing protein | - |
| NMU38_RS12155 (2469837) | 2469837..2470745 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NMU38_RS12160 (2470888) | 2470888..2471220 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NMU38_RS12165 (2471210) | 2471210..2471425 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NMU38_RS12170 (2471577) | 2471577..2471825 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NMU38_RS12175 (2471815) | 2471815..2472099 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMU38_RS12180 (2472270) | 2472270..2472659 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NMU38_RS12185 (2472711) | 2472711..2473790 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NMU38_RS12190 (2473983) | 2473983..2474471 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NMU38_RS12195 (2474516) | 2474516..2476024 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NMU38_RS12200 (2476014) | 2476014..2477255 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NMU38_RS12205 (2477325) | 2477325..2478881 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NMU38_RS12210 (2479058) | 2479058..2480344 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NMU38_RS12215 (2480319) | 2480319..2481344 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NMU38_RS12220 (2481403) | 2481403..2482194 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NMU38_RS12225 (2482240) | 2482240..2483331 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |