MGE detailed information
MGE type: Genomic_island MGE length: 18054 bp
Accession: NZ_CP101379 Location: 2460008..2478061 Organism: Salmonella enterica strain SC2016290 Replicon: chromosome
Accession: NZ_CP101379 Location: 2460008..2478061 Organism: Salmonella enterica strain SC2016290 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU35_RS12120 (2455929) | 2455929..2457131 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NMU35_RS12125 (2457144) | 2457144..2458595 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NMU35_RS12130 (2458739) | 2458739..2459746 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NMU35_RS12135 (2460005) | 2460005..2461471 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NMU35_RS12140 (2462279) | 2462279..2462993 | + | 715 | Protein_2375 | helix-turn-helix domain-containing protein | - |
| NMU35_RS12145 (2463049) | 2463049..2463957 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NMU35_RS12150 (2464100) | 2464100..2464432 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NMU35_RS12155 (2464422) | 2464422..2464637 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NMU35_RS12160 (2464789) | 2464789..2465037 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NMU35_RS12165 (2465027) | 2465027..2465311 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMU35_RS12170 (2465482) | 2465482..2465871 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NMU35_RS12175 (2465923) | 2465923..2467002 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NMU35_RS12180 (2467195) | 2467195..2467683 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NMU35_RS12185 (2467728) | 2467728..2469236 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NMU35_RS12190 (2469226) | 2469226..2470467 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NMU35_RS12195 (2470537) | 2470537..2472093 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NMU35_RS12200 (2472270) | 2472270..2473556 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NMU35_RS12205 (2473531) | 2473531..2474556 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NMU35_RS12210 (2474615) | 2474615..2475406 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NMU35_RS12215 (2475452) | 2475452..2476504 | - | 1053 | WP_255238323.1 | linear amide C-N hydrolase | - |
| NMU35_RS12220 (2476505) | 2476505..2477248 | - | 744 | WP_229038580.1 | IS3 family transposase ISKpn40 | Transposase |
| NMU35_RS12225 (2477323) | 2477323..2477637 | - | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| NMU35_RS12230 (2478189) | 2478189..2479292 | + | 1104 | WP_001194448.1 | hydrogenase small subunit | - |
| NMU35_RS12235 (2479295) | 2479295..2481097 | + | 1803 | WP_022630840.1 | nickel-dependent hydrogenase large subunit | - |
| NMU35_RS12240 (2481048) | 2481048..2481791 | + | 744 | WP_000924456.1 | Ni/Fe-hydrogenase, b-type cytochrome subunit | - |
| NMU35_RS12245 (2481797) | 2481797..2482405 | + | 609 | WP_000852664.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| NMU35_RS12250 (2482405) | 2482405..2482704 | + | 300 | WP_000334904.1 | HypC/HybG/HupF family hydrogenase formation chaperone | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0.01 |