MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP101376 Location: 1027728..1038154 Organism: Salmonella enterica strain SC2016091 Replicon: chromosome
Accession: NZ_CP101376 Location: 1027728..1038154 Organism: Salmonella enterica strain SC2016091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU34_RS04925 (1022841) | 1022841..1023221 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NMU34_RS04930 (1023277) | 1023277..1025844 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NMU34_RS04935 (1026003) | 1026003..1026524 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NMU34_RS04940 (1026696) | 1026696..1027352 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NMU34_RS04945 (1027699) | 1027699..1027904 | + | 206 | Protein_970 | IS5 family transposase ISEcl3 | Transposase |
| NMU34_RS04950 (1027977) | 1027977..1028504 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NMU34_RS04955 (1028501) | 1028501..1028791 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NMU34_RS04960 (1029061) | 1029061..1029239 | - | 179 | Protein_973 | IS3 family transposase | - |
| NMU34_RS04965 (1029480) | 1029480..1029806 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NMU34_RS04970 (1030079) | 1030079..1030426 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NMU34_RS04975 (1030411) | 1030411..1030860 | - | 450 | WP_000381610.1 | membrane protein | - |
| NMU34_RS04980 (1031291) | 1031291..1031734 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NMU34_RS04985 (1032191) | 1032191..1032841 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NMU34_RS04990 (1032838) | 1032838..1034526 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NMU34_RS04995 (1034523) | 1034523..1035641 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NMU34_RS05000 (1035666) | 1035666..1037723 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NMU34_RS05005 (1037747) | 1037747..1038154 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NMU34_RS05010 (1038151) | 1038151..1039446 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NMU34_RS05015 (1039424) | 1039424..1039867 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NMU34_RS05020 (1039867) | 1039867..1040877 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NMU34_RS05025 (1040877) | 1040877..1041788 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NMU34_RS05030 (1041778) | 1041778..1042452 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NMU34_RS05035 (1042478) | 1042478..1042738 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |