MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP101375 Location: 1681902..1692328 Organism: Salmonella enterica strain SC2016090 Replicon: chromosome
Accession: NZ_CP101375 Location: 1681902..1692328 Organism: Salmonella enterica strain SC2016090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU33_RS08215 (1677015) | 1677015..1677395 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NMU33_RS08220 (1677451) | 1677451..1680018 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NMU33_RS08225 (1680177) | 1680177..1680698 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NMU33_RS08230 (1680870) | 1680870..1681526 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NMU33_RS08235 (1681873) | 1681873..1682078 | + | 206 | Protein_1609 | IS5 family transposase ISEcl3 | Transposase |
| NMU33_RS08240 (1682151) | 1682151..1682678 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NMU33_RS08245 (1682675) | 1682675..1682965 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NMU33_RS08250 (1683235) | 1683235..1683413 | - | 179 | Protein_1612 | IS3 family transposase | - |
| NMU33_RS08255 (1683654) | 1683654..1683980 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NMU33_RS08260 (1684253) | 1684253..1684600 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NMU33_RS08265 (1684585) | 1684585..1685034 | - | 450 | WP_000381610.1 | membrane protein | - |
| NMU33_RS08270 (1685465) | 1685465..1685908 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NMU33_RS08275 (1686365) | 1686365..1687015 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NMU33_RS08280 (1687012) | 1687012..1688700 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NMU33_RS08285 (1688697) | 1688697..1689815 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NMU33_RS08290 (1689840) | 1689840..1691897 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NMU33_RS08295 (1691921) | 1691921..1692328 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NMU33_RS08300 (1692325) | 1692325..1693620 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NMU33_RS08305 (1693598) | 1693598..1694041 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NMU33_RS08310 (1694041) | 1694041..1695051 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NMU33_RS08315 (1695051) | 1695051..1695962 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NMU33_RS08320 (1695952) | 1695952..1696626 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NMU33_RS08325 (1696652) | 1696652..1696912 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |