MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP101373 Location: 1076505..1086931 Organism: Salmonella enterica strain SC2016042 Replicon: chromosome
Accession: NZ_CP101373 Location: 1076505..1086931 Organism: Salmonella enterica strain SC2016042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU32_RS05160 (1071618) | 1071618..1071998 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NMU32_RS05165 (1072054) | 1072054..1074621 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NMU32_RS05170 (1074780) | 1074780..1075301 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NMU32_RS05175 (1075473) | 1075473..1076129 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NMU32_RS05180 (1076476) | 1076476..1076681 | + | 206 | Protein_1017 | IS5 family transposase ISEcl3 | Transposase |
| NMU32_RS05185 (1076754) | 1076754..1077281 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NMU32_RS05190 (1077278) | 1077278..1077568 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NMU32_RS05195 (1077838) | 1077838..1078016 | - | 179 | Protein_1020 | IS3 family transposase | - |
| NMU32_RS05200 (1078257) | 1078257..1078583 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NMU32_RS05205 (1078856) | 1078856..1079203 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NMU32_RS05210 (1079188) | 1079188..1079637 | - | 450 | WP_000381610.1 | membrane protein | - |
| NMU32_RS05215 (1080068) | 1080068..1080511 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NMU32_RS05220 (1080968) | 1080968..1081618 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NMU32_RS05225 (1081615) | 1081615..1083303 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NMU32_RS05230 (1083300) | 1083300..1084418 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NMU32_RS05235 (1084443) | 1084443..1086500 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NMU32_RS05240 (1086524) | 1086524..1086931 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NMU32_RS05245 (1086928) | 1086928..1088223 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NMU32_RS05250 (1088201) | 1088201..1088644 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NMU32_RS05255 (1088644) | 1088644..1089654 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NMU32_RS05260 (1089654) | 1089654..1090565 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NMU32_RS05265 (1090555) | 1090555..1091229 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NMU32_RS05270 (1091255) | 1091255..1091515 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |