MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP101372 Location: 1370640..1381066 Organism: Salmonella enterica strain SC2016025 Replicon: chromosome
Accession: NZ_CP101372 Location: 1370640..1381066 Organism: Salmonella enterica strain SC2016025 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU31_RS06730 (1365753) | 1365753..1366133 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NMU31_RS06735 (1366189) | 1366189..1368756 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NMU31_RS06740 (1368915) | 1368915..1369436 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NMU31_RS06745 (1369608) | 1369608..1370264 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NMU31_RS06750 (1370611) | 1370611..1370816 | + | 206 | Protein_1331 | IS5 family transposase ISEcl3 | Transposase |
| NMU31_RS06755 (1370889) | 1370889..1371416 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NMU31_RS06760 (1371413) | 1371413..1371703 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NMU31_RS06765 (1371973) | 1371973..1372151 | - | 179 | Protein_1334 | IS3 family transposase | - |
| NMU31_RS06770 (1372392) | 1372392..1372718 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NMU31_RS06775 (1372991) | 1372991..1373338 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NMU31_RS06780 (1373323) | 1373323..1373772 | - | 450 | WP_000381610.1 | membrane protein | - |
| NMU31_RS06785 (1374203) | 1374203..1374646 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| NMU31_RS06790 (1375103) | 1375103..1375753 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NMU31_RS06795 (1375750) | 1375750..1377438 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NMU31_RS06800 (1377435) | 1377435..1378553 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NMU31_RS06805 (1378578) | 1378578..1380635 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NMU31_RS06810 (1380659) | 1380659..1381066 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NMU31_RS06815 (1381063) | 1381063..1382358 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NMU31_RS06820 (1382336) | 1382336..1382779 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NMU31_RS06825 (1382779) | 1382779..1383789 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NMU31_RS06830 (1383789) | 1383789..1384700 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NMU31_RS06835 (1384690) | 1384690..1385364 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NMU31_RS06840 (1385390) | 1385390..1385650 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |