MGE detailed information
MGE type: Conjugative plasmid MGE length: 85299 bp
Accession: NZ_CP101259 Location: 1..85299 Organism: Escherichia coli strain EC21Z-078 Replicon: plasmid pEC21Z078-85K
Accession: NZ_CP101259 Location: 1..85299 Organism: Escherichia coli strain EC21Z-078 Replicon: plasmid pEC21Z078-85K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NML20_RS23520 (1) | 1..1032 | + | 1032 | WP_048257187.1 | plasmid replication initiator RepA | - |
| NML20_RS23525 (1730) | 1730..1888 | + | 159 | WP_038349023.1 | hypothetical protein | - |
| NML20_RS23530 (1943) | 1943..2212 | + | 270 | WP_032291093.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NML20_RS23535 (2212) | 2212..2490 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NML20_RS23540 (2530) | 2530..3378 | + | 849 | WP_254825250.1 | 3'-5' exonuclease | - |
| NML20_RS23545 (3694) | 3694..4203 | - | 510 | WP_032291091.1 | hypothetical protein | - |
| NML20_RS23550 (4259) | 4259..4861 | - | 603 | WP_000517687.1 | ProQ/FINO family protein | - |
| NML20_RS23555 (5214) | 5214..6560 | + | 1347 | WP_063118133.1 | protein YagA | - |
| NML20_RS23560 (7099) | 7099..7401 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| NML20_RS23565 (7398) | 7398..8024 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| NML20_RS23570 (8228) | 8228..9488 | - | 1261 | Protein_10 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NML20_RS23575 (9488) | 9488..9925 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NML20_RS23580 (9922) | 9922..10170 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NML20_RS23585 (10588) | 10588..11490 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| NML20_RS23590 (11494) | 11494..11580 | + | 87 | Protein_14 | hypothetical protein | - |
| NML20_RS23595 (11585) | 11585..11920 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| NML20_RS23600 (12258) | 12258..13238 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| NML20_RS23605 (13241) | 13241..13663 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| NML20_RS23610 (13667) | 13667..13978 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| NML20_RS23615 (14054) | 14054..14737 | + | 684 | WP_137467167.1 | DNA methylase | - |
| NML20_RS23620 (14738) | 14738..14959 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NML20_RS23625 (14889) | 14889..15407 | + | 519 | WP_231530587.1 | DUF1380 family protein | - |
| NML20_RS23630 (15452) | 15452..16222 | + | 771 | WP_089438460.1 | hypothetical protein | - |
| NML20_RS23635 (16638) | 16638..17063 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| NML20_RS23640 (17110) | 17110..17532 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| NML20_RS23645 (17529) | 17529..17720 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| NML20_RS23650 (17858) | 17858..18106 | + | 249 | WP_001354012.1 | hypothetical protein | - |
| NML20_RS23655 (18490) | 18490..19017 | + | 528 | WP_021532391.1 | single-stranded DNA-binding protein | - |
| NML20_RS23660 (19075) | 19075..19308 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| NML20_RS23665 (19367) | 19367..21325 | + | 1959 | WP_001401579.1 | ParB/RepB/Spo0J family partition protein | - |
| NML20_RS23670 (21380) | 21380..21814 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| NML20_RS23675 (21811) | 21811..22530 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NML20_RS23680 (22527) | 22527..23123 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| NML20_RS23685 (23585) | 23585..24085 | + | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| NML20_RS23690 (24817) | 24817..25251 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| NML20_RS23695 (25345) | 25345..25611 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| NML20_RS23700 (25788) | 25788..26177 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| NML20_RS23705 (26174) | 26174..27075 | + | 902 | Protein_37 | Recombination-promoting nuclease RpnD | VF |
| NML20_RS23710 (27137) | 27137..27343 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| NML20_RS23715 (27374) | 27374..27625 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NML20_RS23720 (28205) | 28205..29053 | + | 849 | WP_089438462.1 | DUF4942 domain-containing protein | - |
| NML20_RS23725 (29139) | 29139..29474 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NML20_RS23730 (29708) | 29708..30040 | + | 333 | WP_063119516.1 | IncI1-type relaxosome accessory protein NikA | - |
| NML20_RS23735 (30051) | 30051..32750 | + | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| NML20_RS23740 (32787) | 32787..35078 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| NML20_RS23745 (35071) | 35071..36141 | - | 1071 | WP_000151590.1 | IncI1-type conjugal transfer protein TrbB | - |
| NML20_RS23750 (36160) | 36160..37368 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (37548) | 37548..37605 | - | 58 | NuclAT_1 | - | - |
| - (37548) | 37548..37605 | - | 58 | NuclAT_1 | - | - |
| - (37548) | 37548..37605 | - | 58 | NuclAT_1 | - | - |
| - (37548) | 37548..37605 | - | 58 | NuclAT_1 | - | - |
| NML20_RS23755 (37675) | 37675..38760 | - | 1086 | WP_072108863.1 | protein finQ | - |
| - (38969) | 38969..39029 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38969) | 38969..39029 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38969) | 38969..39029 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38969) | 38969..39029 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| NML20_RS23760 (39081) | 39081..39233 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| NML20_RS23765 (39305) | 39305..39556 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NML20_RS23770 (39856) | 39856..40152 | + | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| NML20_RS23775 (40217) | 40217..40393 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| NML20_RS23780 (40785) | 40785..40994 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NML20_RS23785 (41066) | 41066..41716 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NML20_RS23790 (41790) | 41790..43958 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| NML20_RS23795 (44055) | 44055..44639 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NML20_RS23800 (44668) | 44668..45870 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NML20_RS23805 (45837) | 45837..46451 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NML20_RS23810 (46451) | 46451..49495 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| NML20_RS23815 (49585) | 49585..50385 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| NML20_RS23820 (50369) | 50369..50557 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| NML20_RS23825 (50621) | 50621..51025 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| NML20_RS23830 (51076) | 51076..51603 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NML20_RS23835 (51603) | 51603..52307 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NML20_RS23840 (52307) | 52307..53596 | - | 1290 | WP_001535701.1 | conjugal transfer protein TraO | - |
| NML20_RS23845 (53599) | 53599..54582 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| NML20_RS23850 (54593) | 54593..55285 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NML20_RS23855 (55282) | 55282..55629 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NML20_RS23860 (55647) | 55647..59414 | - | 3768 | WP_001141534.1 | DUF5710 domain-containing protein | - |
| NML20_RS23865 (59504) | 59504..60055 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| NML20_RS23870 (60070) | 60070..60360 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NML20_RS23875 (60357) | 60357..61505 | - | 1149 | WP_078207115.1 | putative protein YggR | VF |
| NML20_RS23880 (61502) | 61502..62320 | - | 819 | WP_052962236.1 | hypothetical protein | VF |
| NML20_RS23885 (62317) | 62317..62775 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NML20_RS23890 (63170) | 63170..63754 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NML20_RS23895 (63814) | 63814..65016 | - | 1203 | WP_208285465.1 | conjugal transfer protein TraF | - |
| NML20_RS23900 (65102) | 65102..65926 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| NML20_RS23905 (66077) | 66077..67231 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| NML20_RS23910 (68865) | 68865..70301 | - | 1437 | WP_015058206.1 | hypothetical protein | VF |
| NML20_RS23915 (70289) | 70289..70945 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| NML20_RS23920 (70930) | 70930..71490 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| NML20_RS23925 (71500) | 71500..72114 | - | 615 | WP_217822941.1 | hypothetical protein | VF |
| NML20_RS23930 (72131) | 72131..73216 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| NML20_RS23935 (73229) | 73229..74782 | - | 1554 | WP_063118132.1 | hypothetical protein | VF |
| NML20_RS23940 (74793) | 74793..75245 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| NML20_RS23945 (75232) | 75232..76527 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| NML20_RS23950 (76520) | 76520..78202 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NML20_RS23955 (78216) | 78216..78653 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| NML20_RS23960 (78653) | 78653..79720 | - | 1068 | WP_032321486.1 | hypothetical protein | VF |
| NML20_RS23965 (80344) | 80344..80640 | - | 297 | WP_050571830.1 | hypothetical protein | - |
| NML20_RS23970 (80807) | 80807..81061 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NML20_RS23975 (81223) | 81223..81774 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| NML20_RS23980 (81947) | 81947..82630 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NML20_RS23985 (82884) | 82884..83417 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| NML20_RS23990 (83859) | 83859..84146 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NML20_RS23995 (84184) | 84184..84342 | - | 159 | Protein_95 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|