MGE detailed information
MGE type: Genomic_island MGE length: 24410 bp
Accession: NZ_CP101197 Location: 4563526..4587935 Organism: Escherichia coli strain EC21Z-151 Replicon: chromosome
Accession: NZ_CP101197 Location: 4563526..4587935 Organism: Escherichia coli strain EC21Z-151 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NML27_RS21905 (4560151) | 4560151..4561245 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| NML27_RS21910 (4561264) | 4561264..4562514 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| NML27_RS21915 (4562598) | 4562598..4563533 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| NML27_RS21920 (4563526) | 4563526..4564461 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| NML27_RS21925 (4564997) | 4564997..4565449 | - | 453 | WP_000558152.1 | acyltransferase | - |
| NML27_RS21930 (4565970) | 4565970..4566701 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| NML27_RS21935 (4567371) | 4567371..4567901 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| NML27_RS21940 (4569064) | 4569064..4570287 | - | 1224 | WP_001107215.1 | hypothetical protein | - |
| NML27_RS21945 (4570388) | 4570388..4571272 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| NML27_RS21950 (4571475) | 4571475..4572155 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| NML27_RS21955 (4572303) | 4572303..4572980 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| NML27_RS21960 (4572986) | 4572986..4573219 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| NML27_RS21965 (4573309) | 4573309..4574127 | + | 819 | WP_023909075.1 | DUF932 domain-containing protein | - |
| NML27_RS21970 (4574219) | 4574219..4574704 | + | 486 | WP_001586019.1 | antirestriction protein | - |
| NML27_RS21975 (4574720) | 4574720..4575196 | + | 477 | WP_001186773.1 | RadC family protein | - |
| NML27_RS21980 (4575259) | 4575259..4575480 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| NML27_RS21985 (4575643) | 4575643..4576011 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NML27_RS21990 (4576101) | 4576101..4576475 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| NML27_RS21995 (4576472) | 4576472..4576960 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| NML27_RS22000 (4576972) | 4576972..4577169 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| NML27_RS22005 (4577266) | 4577266..4577835 | + | 570 | WP_016231187.1 | DUF4942 domain-containing protein | - |
| NML27_RS22010 (4578584) | 4578584..4580122 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NML27_RS22015 (4580488) | 4580488..4581822 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NML27_RS22020 (4581902) | 4581902..4584049 | + | 2148 | WP_089423814.1 | lysine decarboxylase CadA | - |
| NML27_RS22025 (4584108) | 4584108..4585565 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| NML27_RS22030 (4585802) | 4585802..4587319 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| NML27_RS22035 (4587438) | 4587438..4587611 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NML27_RS22040 (4587639) | 4587639..4587935 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NML27_RS22045 (4588164) | 4588164..4588436 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| NML27_RS22050 (4588448) | 4588448..4588678 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NML27_RS22055 (4588858) | 4588858..4590489 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| NML27_RS22060 (4590486) | 4590486..4591205 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|