MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP100739 Location: 2352158..2364243 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Accession: NZ_CP100739 Location: 2352158..2364243 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL736_RS11295 (2348079) | 2348079..2349281 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NL736_RS11300 (2349294) | 2349294..2350745 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NL736_RS11305 (2350889) | 2350889..2351896 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NL736_RS11310 (2352155) | 2352155..2353621 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NL736_RS11315 (2354429) | 2354429..2355143 | + | 715 | Protein_2212 | helix-turn-helix domain-containing protein | - |
| NL736_RS11320 (2355199) | 2355199..2356107 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NL736_RS11325 (2356250) | 2356250..2356582 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NL736_RS11330 (2356572) | 2356572..2356787 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NL736_RS11335 (2356939) | 2356939..2357187 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL736_RS11340 (2357177) | 2357177..2357461 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL736_RS11345 (2357632) | 2357632..2358021 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NL736_RS11350 (2358073) | 2358073..2359152 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NL736_RS11355 (2359345) | 2359345..2359833 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NL736_RS11360 (2359878) | 2359878..2361386 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NL736_RS11365 (2361376) | 2361376..2362617 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NL736_RS11370 (2362687) | 2362687..2364243 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NL736_RS11375 (2364420) | 2364420..2365706 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NL736_RS11380 (2365681) | 2365681..2366706 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NL736_RS11385 (2366765) | 2366765..2367556 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NL736_RS11390 (2367602) | 2367602..2368693 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |