MGE detailed information
MGE type: Prophage MGE length: 43089 bp
Accession: NZ_CP100739 Location: 1992462..2035550 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Accession: NZ_CP100739 Location: 1992462..2035550 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL736_RS09490 () | 1987519..1987971 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| NL736_RS09495 () | 1988001..1988741 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NL736_RS09500 () | 1988778..1989299 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NL736_RS09505 () | 1989301..1989900 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| NL736_RS09510 () | 1990527..1991422 | - | 896 | Protein_1858 | DUF4034 domain-containing protein | - |
| NL736_RS09515 () | 1991842..1992453 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NL736_RS09520 () | 1992462..1993472 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| NL736_RS09525 () | 1993551..1994336 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| NL736_RS09530 () | 1994333..1995088 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| NL736_RS09535 () | 1995167..1996111 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NL736_RS09540 () | 1996127..1997446 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NL736_RS09545 () | 1997563..1998534 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| NL736_RS09550 () | 1998607..2000049 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NL736_RS09555 () | 2000173..2001042 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NL736_RS09560 () | 2001384..2002859 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NL736_RS09565 () | 2003094..2004905 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NL736_RS09570 () | 2004943..2005584 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL736_RS09575 () | 2005684..2006862 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL736_RS09580 () | 2006993..2007283 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL736_RS09585 () | 2007351..2007704 | + | 354 | WP_001042119.1 | protein YebF | - |
| NL736_RS09590 () | 2007798..2008457 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL736_RS09595 () | 2008670..2010721 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NL736_RS09600 () | 2010756..2011454 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NL736_RS09605 () | 2011478..2012134 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NL736_RS09610 () | 2012242..2012472 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL736_RS09615 () | 2012610..2012984 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL736_RS09620 () | 2012985..2013860 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NL736_RS09625 () | 2013877..2014230 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2014330..2014475 | - | 146 | - | - | Antitoxin Detail |
| - | 2014370..2014473 | + | 104 | - | - | Toxin Detail |
| NL736_RS09630 () | 2014604..2015527 | - | 924 | Protein_1882 | hypothetical protein ; Integrase | Integrase |
| NL736_RS09635 () | 2015791..2016252 | - | 462 | Protein_1883 | DNA breaking-rejoining protein | - |
| NL736_RS09640 () | 2016241..2016432 | + | 192 | Protein_1884 | glycoside hydrolase family 19 protein | - |
| NL736_RS09645 () | 2016486..2017019 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NL736_RS09650 () | 2017276..2017443 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL736_RS09655 () | 2017508..2017696 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NL736_RS09660 () | 2017751..2018011 | + | 261 | Protein_1888 | DUF1441 family protein | - |
| NL736_RS09665 () | 2018013..2018228 | + | 216 | Protein_1889 | shikimate transporter | - |
| NL736_RS09670 () | 2018226..2018570 | + | 345 | Protein_1890 | macro domain-containing protein | - |
| NL736_RS09675 () | 2018580..2019050 | + | 471 | Protein_1891 | tail fiber assembly protein | - |
| NL736_RS09680 () | 2019147..2019347 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL736_RS09685 () | 2019737..2019917 | - | 181 | Protein_1893 | IS3 family transposase | - |
| NL736_RS09690 () | 2019908..2020009 | + | 102 | Protein_1894 | arsenic transporter | - |
| NL736_RS09695 () | 2020631..2020863 | + | 233 | Protein_1895 | helix-turn-helix domain-containing protein | - |
| NL736_RS09700 () | 2021190..2021804 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL736_RS09705 () | 2021814..2021972 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL736_RS09710 () | 2022105..2023019 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NL736_RS09715 () | 2024323..2024745 | - | 423 | Protein_1899 | hypothetical protein ; Integrase | Integrase |
| NL736_RS09720 () | 2024815..2026009 | + | 1195 | Protein_1900 | IS256 family transposase IS285 | Transposase |
| NL736_RS09725 () | 2026155..2026295 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NL736_RS09730 () | 2026461..2026730 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NL736_RS09735 () | 2027100..2027519 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NL736_RS09740 () | 2027650..2028888 | - | 1239 | WP_015060485.1 | IS110 family transposase ISCps4 | Transposase |
| NL736_RS09745 () | 2029405..2029881 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL736_RS09750 () | 2030211..2030606 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL736_RS09755 () | 2031289..2032011 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| NL736_RS09760 () | 2032296..2032460 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL736_RS09765 () | 2032684..2033334 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NL736_RS09770 () | 2033353..2033544 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL736_RS09775 () | 2033655..2033891 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL736_RS09780 () | 2034009..2035448 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL736_RS09785 () | 2035526..2038159 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| NL736_RS09790 () | 2038128..2039411 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NL736_RS09795 () | 2039540..2040037 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.004 |