MGE detailed information
MGE type: Conjugative plasmid MGE length: 87844 bp
Accession: NZ_CP100734 Location: 1..87844 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: plasmid pR18.1932_88k
Accession: NZ_CP100734 Location: 1..87844 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: plasmid pR18.1932_88k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL737_RS24170 (1) | 1..1032 | + | 1032 | WP_254520618.1 | plasmid replication initiator RepA | - |
| NL737_RS24175 (1940) | 1940..2224 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NL737_RS24180 (2224) | 2224..2499 | + | 276 | WP_254520619.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL737_RS24185 (2605) | 2605..2883 | + | 279 | WP_001105069.1 | hypothetical protein | - |
| NL737_RS24190 (3078) | 3078..3344 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| NL737_RS24195 (3344) | 3344..3838 | - | 495 | WP_001582574.1 | hypothetical protein | - |
| NL737_RS24200 (3894) | 3894..4496 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| NL737_RS24205 (4850) | 4850..6196 | + | 1347 | WP_001132032.1 | protein YagA | - |
| NL737_RS24210 (6475) | 6475..8355 | + | 1881 | WP_254520620.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NL737_RS24215 (8377) | 8377..8712 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| NL737_RS24220 (8841) | 8841..9188 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| NL737_RS24225 (9208) | 9208..9798 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| NL737_RS24230 (9798) | 9798..10052 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| NL737_RS24235 (10621) | 10621..11034 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NL737_RS24240 (11036) | 11036..11815 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| NL737_RS24245 (11995) | 11995..12639 | + | 645 | WP_001144036.1 | ParA family protein | - |
| NL737_RS24250 (12726) | 12726..13034 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| NL737_RS24255 (13448) | 13448..14428 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| NL737_RS24260 (14421) | 14421..14837 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| NL737_RS24265 (14839) | 14839..16113 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| NL737_RS24270 (16113) | 16113..16550 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL737_RS24275 (16547) | 16547..16795 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NL737_RS24280 (17213) | 17213..18115 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| NL737_RS24285 (18112) | 18112..18423 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| NL737_RS24290 (18499) | 18499..19182 | + | 684 | WP_000086147.1 | DNA methylase | - |
| NL737_RS24295 (19183) | 19183..19404 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| NL737_RS24300 (19418) | 19418..19852 | + | 435 | WP_040072108.1 | DUF1380 family protein | - |
| NL737_RS24305 (19898) | 19898..20674 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| NL737_RS24310 (21086) | 21086..21511 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| NL737_RS24315 (21558) | 21558..21980 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| NL737_RS24320 (21977) | 21977..22168 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| NL737_RS24325 (22239) | 22239..22553 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| NL737_RS24330 (22937) | 22937..23464 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| NL737_RS24335 (23522) | 23522..23755 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NL737_RS24340 (23814) | 23814..25772 | + | 1959 | WP_040072102.1 | ParB/RepB/Spo0J family partition protein | - |
| NL737_RS24345 (25827) | 25827..26261 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| NL737_RS24350 (26258) | 26258..26977 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| NL737_RS24355 (26974) | 26974..27570 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| NL737_RS24360 (28033) | 28033..28533 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| NL737_RS24365 (29262) | 29262..29696 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NL737_RS24370 (29790) | 29790..30056 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NL737_RS24375 (30121) | 30121..31011 | + | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| NL737_RS24380 (31011) | 31011..31256 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| NL737_RS24385 (31287) | 31287..31538 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| NL737_RS24390 (32118) | 32118..32966 | + | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| NL737_RS24395 (33052) | 33052..33387 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NL737_RS24400 (33621) | 33621..33953 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NL737_RS24405 (33964) | 33964..36663 | + | 2700 | WP_010891268.1 | hypothetical protein | Relaxase |
| NL737_RS24410 (36700) | 36700..38991 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| NL737_RS24415 (38984) | 38984..40054 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| NL737_RS24420 (40073) | 40073..41281 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (41461) | 41461..41523 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (41461) | 41461..41523 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (41461) | 41461..41523 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (41461) | 41461..41523 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| NL737_RS24425 (41573) | 41573..41725 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| NL737_RS24430 (41797) | 41797..42048 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NL737_RS24435 (42348) | 42348..42644 | + | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| NL737_RS24440 (42709) | 42709..42885 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| NL737_RS24445 (43277) | 43277..43486 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NL737_RS24450 (43558) | 43558..44220 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL737_RS24455 (44285) | 44285..46447 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| NL737_RS24460 (46544) | 46544..47128 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NL737_RS24465 (47157) | 47157..48359 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NL737_RS24470 (48326) | 48326..48940 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| NL737_RS24475 (48940) | 48940..51984 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| NL737_RS24480 (52074) | 52074..52874 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NL737_RS24485 (52858) | 52858..53046 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NL737_RS24490 (53110) | 53110..53514 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| NL737_RS24495 (53565) | 53565..54092 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NL737_RS24500 (54092) | 54092..54796 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NL737_RS24505 (54796) | 54796..56085 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| NL737_RS24510 (56088) | 56088..57071 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| NL737_RS24515 (57082) | 57082..57774 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| NL737_RS24520 (57771) | 57771..58118 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NL737_RS24525 (58136) | 58136..61903 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| NL737_RS24530 (61993) | 61993..62544 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| NL737_RS24535 (62559) | 62559..62849 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NL737_RS24540 (62846) | 62846..63994 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NL737_RS24545 (63991) | 63991..64809 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| NL737_RS24550 (64806) | 64806..65264 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NL737_RS24555 (65659) | 65659..66243 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NL737_RS24560 (66303) | 66303..67505 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| NL737_RS24565 (67590) | 67590..68414 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| NL737_RS24570 (68565) | 68565..69719 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| NL737_RS24575 (69718) | 69718..70002 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| NL737_RS24580 (71240) | 71240..71488 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| NL737_RS24585 (71485) | 71485..72777 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| NL737_RS24590 (72777) | 72777..73433 | - | 657 | WP_254520617.1 | hypothetical protein | VF |
| NL737_RS24595 (73418) | 73418..73978 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| NL737_RS24600 (73988) | 73988..74602 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| NL737_RS24605 (74620) | 74620..75717 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NL737_RS24610 (75730) | 75730..77283 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| NL737_RS24615 (77294) | 77294..77746 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| NL737_RS24620 (77733) | 77733..79028 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| NL737_RS24625 (79021) | 79021..80703 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NL737_RS24630 (80717) | 80717..81154 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| NL737_RS24635 (81154) | 81154..82221 | - | 1068 | WP_044707330.1 | hypothetical protein | VF |
| NL737_RS24640 (82895) | 82895..83347 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| NL737_RS24645 (83390) | 83390..83644 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| NL737_RS24650 (83912) | 83912..84478 | - | 567 | WP_000776428.1 | protein TraD | - |
| NL737_RS24655 (84492) | 84492..85175 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| NL737_RS24660 (85429) | 85429..85962 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| NL737_RS24665 (86404) | 86404..86691 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NL737_RS24670 (86609) | 86609..86839 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|