MGE detailed information
MGE type: Prophage MGE length: 56015 bp
Accession: NZ_CP100732 Location: 1992461..2048475 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: chromosome
Accession: NZ_CP100732 Location: 1992461..2048475 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL737_RS09490 () | 1987518..1987970 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| NL737_RS09495 () | 1988000..1988740 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NL737_RS09500 () | 1988777..1989298 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NL737_RS09505 () | 1989300..1989899 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| NL737_RS09510 () | 1990526..1991421 | - | 896 | Protein_1858 | DUF4034 domain-containing protein | - |
| NL737_RS09515 () | 1991841..1992452 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NL737_RS09520 () | 1992461..1993471 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NL737_RS09525 () | 1993550..1994335 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| NL737_RS09530 () | 1994332..1995087 | - | 756 | WP_000203014.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NL737_RS09535 () | 1995166..1996110 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NL737_RS09540 () | 1996126..1997445 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NL737_RS09545 () | 1997562..1998533 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NL737_RS09550 () | 1998606..2000048 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NL737_RS09555 () | 2000172..2001041 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NL737_RS09560 () | 2001383..2002858 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NL737_RS09565 () | 2003093..2004904 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NL737_RS09570 () | 2004942..2005583 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL737_RS09575 () | 2005683..2006861 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL737_RS09580 () | 2006992..2007282 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL737_RS09585 () | 2007350..2007703 | + | 354 | WP_001042119.1 | protein YebF | - |
| NL737_RS09590 () | 2007797..2008456 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL737_RS09595 () | 2008669..2010720 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NL737_RS09600 () | 2010755..2011453 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NL737_RS09605 () | 2011477..2012133 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NL737_RS09610 () | 2012241..2012471 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL737_RS09615 () | 2012609..2012983 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL737_RS09620 () | 2012984..2013859 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NL737_RS09625 () | 2013876..2014229 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2014329..2014474 | - | 146 | - | - | Antitoxin Detail |
| - | 2014369..2014472 | + | 104 | - | - | Toxin Detail |
| NL737_RS09630 () | 2014603..2015526 | - | 924 | Protein_1882 | hypothetical protein ; Integrase | Integrase |
| NL737_RS09635 () | 2015790..2016251 | - | 462 | Protein_1883 | DNA breaking-rejoining protein | - |
| NL737_RS09640 () | 2016240..2016431 | + | 192 | Protein_1884 | glycoside hydrolase family 19 protein | - |
| NL737_RS09645 () | 2016485..2017018 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NL737_RS09650 () | 2017275..2017442 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL737_RS09655 () | 2017507..2017695 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NL737_RS09660 () | 2017750..2018010 | + | 261 | Protein_1888 | DUF1441 family protein | - |
| NL737_RS09665 () | 2018012..2018227 | + | 216 | Protein_1889 | shikimate transporter | - |
| NL737_RS09670 () | 2018225..2018569 | + | 345 | Protein_1890 | macro domain-containing protein | - |
| NL737_RS09675 () | 2018579..2019049 | + | 471 | Protein_1891 | tail fiber assembly protein | - |
| NL737_RS09680 () | 2019146..2019346 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL737_RS09685 () | 2019736..2019916 | - | 181 | Protein_1893 | IS3 family transposase | - |
| NL737_RS09690 () | 2019907..2020008 | + | 102 | Protein_1894 | arsenic transporter | - |
| NL737_RS09695 () | 2020630..2020862 | + | 233 | Protein_1895 | helix-turn-helix domain-containing protein | - |
| NL737_RS09700 () | 2021189..2021803 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL737_RS09705 () | 2021813..2021971 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL737_RS09710 () | 2022104..2023018 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NL737_RS09715 () | 2024322..2024744 | - | 423 | Protein_1899 | hypothetical protein ; Integrase | Integrase |
| NL737_RS09720 () | 2024814..2026008 | + | 1195 | Protein_1900 | IS256 family transposase IS285 | Transposase |
| NL737_RS09725 () | 2026154..2026294 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NL737_RS09730 () | 2026460..2026729 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NL737_RS09735 () | 2027099..2027518 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NL737_RS09740 () | 2027649..2028887 | - | 1239 | WP_015060485.1 | IS110 family transposase ISCps4 | Transposase |
| NL737_RS09745 () | 2029404..2029880 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL737_RS09750 () | 2030210..2030605 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL737_RS09755 () | 2031288..2032010 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| NL737_RS09760 () | 2032295..2032459 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL737_RS09765 () | 2032683..2033333 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NL737_RS09770 () | 2033352..2033543 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL737_RS09775 () | 2033654..2033890 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL737_RS09780 () | 2034008..2035447 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL737_RS09785 () | 2035525..2038158 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| NL737_RS09790 () | 2038127..2039410 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NL737_RS09795 () | 2039539..2040036 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NL737_RS09800 () | 2040134..2040820 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NL737_RS09805 () | 2040840..2042888 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NL737_RS09810 () | 2043082..2043963 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NL737_RS09815 () | 2044011..2045384 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NL737_RS09820 () | 2045560..2046351 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NL737_RS09825 () | 2046563..2046802 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NL737_RS09830 () | 2046960..2047103 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NL737_RS09835 () | 2047174..2047461 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NL737_RS09840 () | 2048110..2048253 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NL737_RS09845 () | 2048266..2048475 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NL737_RS09850 () | 2048695..2050440 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NL737_RS09855 () | 2050506..2051315 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NL737_RS09860 () | 2051312..2051878 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NL737_RS09865 () | 2052288..2052746 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.01 |