MGE detailed information
MGE type: Genomic_island MGE length: 10426 bp
Accession: NZ_CP100718 Location: 1048420..1058845 Organism: Salmonella enterica subsp. enterica serovar Weltevreden strain R17.4942 Replicon: chromosome
Accession: NZ_CP100718 Location: 1048420..1058845 Organism: Salmonella enterica subsp. enterica serovar Weltevreden strain R17.4942 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL732_RS05045 (1043535) | 1043535..1043915 | + | 381 | WP_001070475.1 | DUF4440 domain-containing protein | - |
| NL732_RS05050 (1043971) | 1043971..1046538 | - | 2568 | WP_001005816.1 | DNA mismatch repair protein MutS | - |
| NL732_RS05055 (1046696) | 1046696..1047217 | + | 522 | WP_015633084.1 | hypothetical protein | - |
| NL732_RS05060 (1047388) | 1047388..1048044 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| NL732_RS05065 (1048379) | 1048379..1048596 | + | 218 | Protein_993 | IS5 family transposase ISEcl3 | Transposase |
| NL732_RS05070 (1048669) | 1048669..1049196 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NL732_RS05075 (1049193) | 1049193..1049483 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NL732_RS05080 (1049752) | 1049752..1049930 | - | 179 | Protein_996 | IS3 family transposase | - |
| NL732_RS05085 (1050171) | 1050171..1050497 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NL732_RS05090 (1050770) | 1050770..1051117 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| NL732_RS05095 (1051102) | 1051102..1051551 | - | 450 | WP_000381608.1 | hypothetical protein | - |
| NL732_RS05100 (1051983) | 1051983..1052426 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| NL732_RS05105 (1052882) | 1052882..1053532 | + | 651 | WP_023166786.1 | Invasion protein InvF | VF |
| NL732_RS05110 (1053529) | 1053529..1055217 | + | 1689 | WP_000848114.1 | Type 3 secretion system secretin | VF |
| NL732_RS05115 (1055214) | 1055214..1056332 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NL732_RS05120 (1056357) | 1056357..1058414 | + | 2058 | WP_000927218.1 | Invasion protein InvA | VF |
| NL732_RS05125 (1058438) | 1058438..1058845 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NL732_RS05130 (1058842) | 1058842..1060137 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NL732_RS05135 (1060115) | 1060115..1060558 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| NL732_RS05140 (1060558) | 1060558..1061568 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| NL732_RS05145 (1061568) | 1061568..1062479 | + | 912 | WP_000058740.1 | SPI-1 type III secretion system protein SpaO | - |
| NL732_RS05150 (1062469) | 1062469..1063143 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NL732_RS05155 (1063169) | 1063169..1063429 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.009 |