MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP100715 Location: 2420066..2432151 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Accession: NZ_CP100715 Location: 2420066..2432151 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL730_RS11900 (2415987) | 2415987..2417189 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NL730_RS11905 (2417202) | 2417202..2418653 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NL730_RS11910 (2418797) | 2418797..2419804 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NL730_RS11915 (2420063) | 2420063..2421529 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NL730_RS11920 (2422337) | 2422337..2423051 | + | 715 | Protein_2332 | helix-turn-helix domain-containing protein | - |
| NL730_RS11925 (2423107) | 2423107..2424015 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NL730_RS11930 (2424158) | 2424158..2424490 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NL730_RS11935 (2424480) | 2424480..2424695 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NL730_RS11940 (2424847) | 2424847..2425095 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL730_RS11945 (2425085) | 2425085..2425369 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL730_RS11950 (2425540) | 2425540..2425929 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NL730_RS11955 (2425981) | 2425981..2427060 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NL730_RS11960 (2427253) | 2427253..2427741 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NL730_RS11965 (2427786) | 2427786..2429294 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NL730_RS11970 (2429284) | 2429284..2430525 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NL730_RS11975 (2430595) | 2430595..2432151 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NL730_RS11980 (2432328) | 2432328..2433614 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NL730_RS11985 (2433589) | 2433589..2434614 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NL730_RS11990 (2434673) | 2434673..2435464 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NL730_RS11995 (2435510) | 2435510..2436601 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |