MGE detailed information
MGE type: Prophage MGE length: 25392 bp
Accession: NZ_CP100715 Location: 2078061..2103452 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Accession: NZ_CP100715 Location: 2078061..2103452 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL730_RS10175 () | 2074334..2074975 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL730_RS10180 () | 2075075..2076253 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL730_RS10185 () | 2076384..2076674 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL730_RS10190 () | 2076742..2077095 | + | 354 | WP_001042119.1 | protein YebF | - |
| NL730_RS10195 () | 2077189..2077848 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL730_RS10200 () | 2078061..2080112 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NL730_RS10205 () | 2080147..2080845 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NL730_RS10210 () | 2080869..2081525 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NL730_RS10215 () | 2081633..2081863 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL730_RS10220 () | 2082001..2082375 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL730_RS10225 () | 2082376..2083251 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NL730_RS10230 () | 2083268..2083621 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2083721..2083866 | - | 146 | - | - | Antitoxin Detail |
| - | 2083761..2083864 | + | 104 | - | - | Toxin Detail |
| NL730_RS10235 () | 2083995..2084918 | - | 924 | Protein_2002 | putative inner membrane protein Smp ; Integrase | Integrase |
| NL730_RS10240 () | 2085182..2085643 | - | 462 | Protein_2003 | DNA breaking-rejoining protein | - |
| NL730_RS10245 () | 2085632..2085823 | + | 192 | Protein_2004 | glycoside hydrolase family 19 protein | - |
| NL730_RS10250 () | 2085877..2086410 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NL730_RS10255 () | 2086667..2086834 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL730_RS10260 () | 2086899..2087087 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NL730_RS10265 () | 2087142..2087402 | + | 261 | Protein_2008 | DUF1441 family protein | - |
| NL730_RS10270 () | 2087404..2087619 | + | 216 | Protein_2009 | shikimate transporter | - |
| NL730_RS10275 () | 2087617..2087961 | + | 345 | Protein_2010 | macro domain-containing protein | - |
| NL730_RS10280 () | 2087971..2088441 | + | 471 | Protein_2011 | tail fiber assembly protein | - |
| NL730_RS10285 () | 2088538..2088738 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL730_RS10290 () | 2089128..2089308 | - | 181 | Protein_2013 | IS3 family transposase | - |
| NL730_RS10295 () | 2089299..2089400 | + | 102 | Protein_2014 | arsenic transporter | - |
| NL730_RS10300 () | 2090022..2090254 | + | 233 | Protein_2015 | helix-turn-helix domain-containing protein | - |
| NL730_RS10305 () | 2090581..2091195 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL730_RS10310 () | 2091205..2091363 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL730_RS10315 () | 2091496..2092410 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NL730_RS10320 () | 2093723..2094145 | - | 423 | Protein_2019 | Peptidase T ; Integrase | Integrase |
| NL730_RS10325 () | 2094215..2095409 | + | 1195 | Protein_2020 | IS256 family transposase IS285 | Transposase |
| NL730_RS10330 () | 2095555..2095695 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NL730_RS10335 () | 2095861..2096130 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NL730_RS10340 () | 2096500..2096919 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NL730_RS10345 () | 2097307..2097783 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL730_RS10350 () | 2098113..2098508 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL730_RS10355 () | 2099191..2099913 | + | 723 | WP_000182072.1 | Triosephosphate isomerase | VF |
| NL730_RS10360 () | 2100198..2100362 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL730_RS10365 () | 2100586..2101236 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NL730_RS10370 () | 2101255..2101446 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL730_RS10375 () | 2101557..2101793 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL730_RS10380 () | 2101911..2103350 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL730_RS10385 () | 2103428..2106061 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| NL730_RS10390 () | 2106030..2107313 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NL730_RS10395 () | 2107442..2107939 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 |