MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP100707 Location: 2428623..2440708 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Accession: NZ_CP100707 Location: 2428623..2440708 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL735_RS11960 (2424544) | 2424544..2425746 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NL735_RS11965 (2425759) | 2425759..2427210 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NL735_RS11970 (2427354) | 2427354..2428361 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NL735_RS11975 (2428620) | 2428620..2430086 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NL735_RS11980 (2430894) | 2430894..2431608 | + | 715 | Protein_2344 | helix-turn-helix domain-containing protein | - |
| NL735_RS11985 (2431664) | 2431664..2432572 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NL735_RS11990 (2432715) | 2432715..2433047 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NL735_RS11995 (2433037) | 2433037..2433252 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NL735_RS12000 (2433404) | 2433404..2433652 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL735_RS12005 (2433642) | 2433642..2433926 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL735_RS12010 (2434097) | 2434097..2434486 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NL735_RS12015 (2434538) | 2434538..2435617 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NL735_RS12020 (2435810) | 2435810..2436298 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NL735_RS12025 (2436343) | 2436343..2437851 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NL735_RS12030 (2437841) | 2437841..2439082 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NL735_RS12035 (2439152) | 2439152..2440708 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NL735_RS12040 (2440885) | 2440885..2442171 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NL735_RS12045 (2442146) | 2442146..2443171 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NL735_RS12050 (2443230) | 2443230..2444021 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NL735_RS12055 (2444067) | 2444067..2445158 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |