MGE detailed information
MGE type: Genomic_island MGE length: 10426 bp
Accession: NZ_CP100695 Location: 1013483..1023908 Organism: Salmonella enterica subsp. enterica serovar Weltevreden strain R18.0830 Replicon: chromosome
Accession: NZ_CP100695 Location: 1013483..1023908 Organism: Salmonella enterica subsp. enterica serovar Weltevreden strain R18.0830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL711_RS04890 (1008598) | 1008598..1008978 | + | 381 | WP_001070475.1 | DUF4440 domain-containing protein | - |
| NL711_RS04895 (1009034) | 1009034..1011601 | - | 2568 | WP_001005816.1 | DNA mismatch repair protein MutS | - |
| NL711_RS04900 (1011759) | 1011759..1012280 | + | 522 | WP_015633084.1 | hypothetical protein | - |
| NL711_RS04905 (1012451) | 1012451..1013107 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| NL711_RS04910 (1013442) | 1013442..1013659 | + | 218 | Protein_962 | IS5 family transposase ISEcl3 | Transposase |
| NL711_RS04915 (1013732) | 1013732..1014259 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NL711_RS04920 (1014256) | 1014256..1014546 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NL711_RS04925 (1014815) | 1014815..1014993 | - | 179 | Protein_965 | IS3 family transposase | - |
| NL711_RS04930 (1015234) | 1015234..1015560 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NL711_RS04935 (1015833) | 1015833..1016180 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| NL711_RS04940 (1016165) | 1016165..1016614 | - | 450 | WP_000381608.1 | hypothetical protein | - |
| NL711_RS04945 (1017046) | 1017046..1017489 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| NL711_RS04950 (1017945) | 1017945..1018595 | + | 651 | WP_023166786.1 | Invasion protein InvF | VF |
| NL711_RS04955 (1018592) | 1018592..1020280 | + | 1689 | WP_000848114.1 | Type 3 secretion system secretin | VF |
| NL711_RS04960 (1020277) | 1020277..1021395 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NL711_RS04965 (1021420) | 1021420..1023477 | + | 2058 | WP_000927218.1 | Invasion protein InvA | VF |
| NL711_RS04970 (1023501) | 1023501..1023908 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NL711_RS04975 (1023905) | 1023905..1025200 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NL711_RS04980 (1025178) | 1025178..1025621 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| NL711_RS04985 (1025621) | 1025621..1026631 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| NL711_RS04990 (1026631) | 1026631..1027542 | + | 912 | WP_000058740.1 | SPI-1 type III secretion system protein SpaO | - |
| NL711_RS04995 (1027532) | 1027532..1028206 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NL711_RS05000 (1028232) | 1028232..1028492 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.009 |