MGE detailed information
MGE type: Genomic_island MGE length: 10341 bp
Accession: NZ_CP100691 Location: 2541701..2552041 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Accession: NZ_CP100691 Location: 2541701..2552041 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL690_RS12405 (2537092) | 2537092..2538543 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NL690_RS12410 (2538687) | 2538687..2539694 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NL690_RS12415 (2539953) | 2539953..2541419 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NL690_RS12420 (2542227) | 2542227..2542941 | + | 715 | Protein_2431 | helix-turn-helix domain-containing protein | - |
| NL690_RS12425 (2542997) | 2542997..2543905 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NL690_RS12430 (2544048) | 2544048..2544380 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NL690_RS12435 (2544370) | 2544370..2544585 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NL690_RS12440 (2544737) | 2544737..2544985 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL690_RS12445 (2544975) | 2544975..2545259 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL690_RS12450 (2545430) | 2545430..2545819 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NL690_RS12455 (2545871) | 2545871..2546950 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NL690_RS12460 (2547143) | 2547143..2547631 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NL690_RS12465 (2547676) | 2547676..2549184 | + | 1509 | WP_099949671.1 | FAD-dependent oxidoreductase | - |
| NL690_RS12470 (2549174) | 2549174..2550415 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NL690_RS12475 (2550485) | 2550485..2552041 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NL690_RS12480 (2552218) | 2552218..2553504 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NL690_RS12485 (2553479) | 2553479..2554504 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NL690_RS12490 (2554563) | 2554563..2555354 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NL690_RS12495 (2555400) | 2555400..2556491 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0.004 |