MGE detailed information
MGE type: Genomic_island MGE length: 11459 bp
Accession: NZ_CP100691 Location: 1075041..1086499 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Accession: NZ_CP100691 Location: 1075041..1086499 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL690_RS05155 (1071186) | 1071186..1071566 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NL690_RS05160 (1071622) | 1071622..1074189 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NL690_RS05165 (1074348) | 1074348..1074869 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NL690_RS05170 (1075041) | 1075041..1075697 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NL690_RS05175 (1076044) | 1076044..1076249 | + | 206 | Protein_1016 | IS5 family transposase ISEcl3 | Transposase |
| NL690_RS05180 (1076322) | 1076322..1076849 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NL690_RS05185 (1076846) | 1076846..1077136 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NL690_RS05190 (1077406) | 1077406..1077584 | - | 179 | Protein_1019 | IS3 family transposase | - |
| NL690_RS05195 (1077825) | 1077825..1078151 | + | 327 | WP_254520966.1 | hypothetical protein | - |
| NL690_RS05200 (1078424) | 1078424..1078771 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NL690_RS05205 (1078756) | 1078756..1079205 | - | 450 | WP_000381610.1 | membrane protein | - |
| NL690_RS05210 (1079636) | 1079636..1080079 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| NL690_RS05215 (1080536) | 1080536..1081186 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| NL690_RS05220 (1081183) | 1081183..1082871 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| NL690_RS05225 (1082868) | 1082868..1083986 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| NL690_RS05230 (1084011) | 1084011..1086068 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| NL690_RS05235 (1086092) | 1086092..1086499 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| NL690_RS05240 (1086496) | 1086496..1087791 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NL690_RS05245 (1087769) | 1087769..1088212 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NL690_RS05250 (1088212) | 1088212..1089222 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NL690_RS05255 (1089222) | 1089222..1090133 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NL690_RS05260 (1090123) | 1090123..1090797 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NL690_RS05265 (1090823) | 1090823..1091083 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.003 |