MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP100666 Location: 3643987..3654597 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain R18.1630 Replicon: chromosome
Accession: NZ_CP100666 Location: 3643987..3654597 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain R18.1630 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL709_RS17775 (3639921) | 3639921..3640376 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NL709_RS17780 (3640518) | 3640518..3641747 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| NL709_RS17785 (3641778) | 3641778..3642050 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NL709_RS17790 (3642172) | 3642172..3643032 | + | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| NL709_RS17795 (3643242) | 3643242..3644000 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| NL709_RS17800 (3643987) | 3643987..3644499 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| NL709_RS17805 (3644643) | 3644643..3645719 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| NL709_RS17810 (3645716) | 3645716..3646459 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| NL709_RS17815 (3646500) | 3646500..3648983 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| NL709_RS17820 (3649103) | 3649103..3649684 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| NL709_RS17825 (3650403) | 3650403..3651035 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| NL709_RS17830 (3651082) | 3651082..3651618 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| NL709_RS17835 (3652426) | 3652426..3652824 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NL709_RS17840 (3652824) | 3652824..3653051 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NL709_RS17845 (3653260) | 3653260..3653511 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| NL709_RS17850 (3653791) | 3653791..3654597 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| NL709_RS17860 (3654882) | 3654882..3655640 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| NL709_RS17865 (3655905) | 3655905..3656450 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NL709_RS17870 (3656526) | 3656526..3658043 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |