MGE detailed information
MGE type: Conjugative plasmid MGE length: 135017 bp
Accession: NZ_CP100545 Location: 1..135017 Organism: Escherichia coli strain LH09-a Replicon: plasmid pLH09-a-A
Accession: NZ_CP100545 Location: 1..135017 Organism: Escherichia coli strain LH09-a Replicon: plasmid pLH09-a-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ06_RS22345 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NLZ06_RS22350 (1305) | 1305..2045 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| NLZ06_RS22355 (2166) | 2166..2354 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| NLZ06_RS22360 (2728) | 2728..3630 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| NLZ06_RS22365 (3699) | 3699..4808 | - | 1110 | WP_001696610.1 | SDR family oxidoreductase | - |
| NLZ06_RS22370 (5240) | 5240..6193 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| NLZ06_RS22375 (7446) | 7446..7986 | - | 541 | Protein_6 | IS3 family transposase IS1351 | Transposase |
| NLZ06_RS22380 (9597) | 9597..10784 | + | 1188 | WP_001696612.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NLZ06_RS22385 (10781) | 10781..12721 | + | 1941 | WP_001610286.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| NLZ06_RS22390 (12725) | 12725..14095 | + | 1371 | WP_001696614.1 | efflux transporter outer membrane subunit | - |
| NLZ06_RS22395 (14426) | 14426..15739 | + | 1314 | Protein_10 | IS4 family transposase | - |
| NLZ06_RS22400 (16479) | 16479..17267 | + | 789 | WP_001696616.1 | hypothetical protein | - |
| NLZ06_RS22405 (17269) | 17269..19533 | + | 2265 | WP_001610298.1 | UvrD-helicase domain-containing protein | - |
| NLZ06_RS22410 (19784) | 19784..19888 | + | 105 | Protein_13 | IS3 family transposase IS1351 | Transposase |
| NLZ06_RS22415 (20294) | 20294..21639 | - | 1346 | Protein_14 | ISNCY family transposase ISLad2 | Transposase |
| NLZ06_RS22420 (21875) | 21875..22246 | - | 372 | WP_001610302.1 | hypothetical protein | - |
| NLZ06_RS22425 (22289) | 22289..22756 | - | 468 | WP_001610303.1 | hypothetical protein | - |
| NLZ06_RS22430 (22756) | 22756..23025 | - | 270 | WP_001610304.1 | hypothetical protein | - |
| NLZ06_RS22435 (23257) | 23257..24654 | - | 1398 | WP_001610305.1 | ISNCY family transposase ISKpn21 | Transposase |
| NLZ06_RS22440 (24915) | 24915..25913 | + | 999 | WP_001610306.1 | hypothetical protein | - |
| NLZ06_RS22445 (25917) | 25917..26834 | + | 918 | WP_001610307.1 | S-4TM family putative pore-forming effector | - |
| NLZ06_RS22450 (26865) | 26865..28268 | - | 1404 | WP_096248357.1 | ISNCY family transposase ISKpn21 | Transposase |
| NLZ06_RS22455 (28539) | 28539..28688 | - | 150 | Protein_22 | IS3 family transposase | - |
| NLZ06_RS22460 (28866) | 28866..30059 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| NLZ06_RS22470 (33154) | 33154..33447 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| NLZ06_RS22475 (33531) | 33531..33664 | - | 134 | Protein_26 | Rz1 family lipoprotein | - |
| NLZ06_RS22480 (33758) | 33758..34138 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ06_RS22485 (34135) | 34135..34482 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ06_RS22490 (34532) | 34532..36070 | + | 1539 | WP_032219885.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ06_RS22495 (36708) | 36708..37732 | + | 1025 | Protein_30 | integrase core domain-containing protein | - |
| NLZ06_RS22500 (39043) | 39043..40158 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| NLZ06_RS22505 (40298) | 40298..43957 | + | 3660 | WP_254521284.1 | Multidrug efflux ATP-binding/permease protein | VF |
| NLZ06_RS22510 (44061) | 44061..45290 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| NLZ06_RS22515 (45375) | 45375..46331 | + | 957 | WP_001610312.1 | Ferri-bacillibactin esterase BesA | VF |
| NLZ06_RS22520 (46376) | 46376..48553 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| NLZ06_RS22525 (49408) | 49408..50442 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| NLZ06_RS22530 (50623) | 50623..50924 | + | 302 | Protein_37 | hypothetical protein | - |
| NLZ06_RS22535 (51002) | 51002..51310 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| NLZ06_RS22540 (51463) | 51463..51588 | - | 126 | Protein_39 | type II toxin-antitoxin system toxin YacB | - |
| NLZ06_RS22545 (51588) | 51588..51856 | - | 269 | Protein_40 | type II toxin-antitoxin system antitoxin YacA | - |
| NLZ06_RS22550 (52500) | 52500..53740 | + | 1241 | Protein_41 | HlyD family secretion protein | - |
| NLZ06_RS22555 (53733) | 53733..55829 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| NLZ06_RS22560 (55999) | 55999..56310 | - | 312 | WP_001259758.1 | colicin V | - |
| NLZ06_RS22565 (56288) | 56288..56524 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| NLZ06_RS22570 (56643) | 56643..57086 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| NLZ06_RS22575 (57058) | 57058..57462 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| NLZ06_RS22580 (57464) | 57464..57733 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| NLZ06_RS22585 (57730) | 57730..57996 | + | 267 | WP_001610313.1 | FAD-dependent oxidoreductase | - |
| NLZ06_RS22590 (58052) | 58052..58504 | - | 453 | WP_000670963.1 | acyltransferase | - |
| NLZ06_RS22595 (58797) | 58797..59057 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| NLZ06_RS22600 (59054) | 59054..59644 | + | 591 | WP_001350923.1 | hypothetical protein | - |
| NLZ06_RS22605 (59706) | 59706..59921 | - | 216 | Protein_52 | DUF6404 family protein | - |
| NLZ06_RS22610 (60050) | 60050..60385 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| NLZ06_RS22615 (60407) | 60407..62287 | - | 1881 | WP_001610315.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NLZ06_RS22620 (62473) | 62473..63321 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| NLZ06_RS22625 (63367) | 63367..63645 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NLZ06_RS22630 (63645) | 63645..63914 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NLZ06_RS22635 (63987) | 63987..64127 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| NLZ06_RS22640 (64830) | 64830..65687 | - | 858 | WP_001610316.1 | incFII family plasmid replication initiator RepA | - |
| NLZ06_RS22645 (65680) | 65680..65727 | - | 48 | WP_077822033.1 | hypothetical protein | - |
| NLZ06_RS22650 (65718) | 65718..65954 | + | 237 | WP_223368648.1 | replication protein RepA | - |
| NLZ06_RS22655 (65980) | 65980..66240 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| NLZ06_RS22660 (66479) | 66479..67069 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| NLZ06_RS22665 (67107) | 67107..67316 | - | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| NLZ06_RS22670 (67362) | 67362..67823 | - | 462 | WP_106508624.1 | thermonuclease family protein | - |
| NLZ06_RS22675 (68023) | 68023..68274 | - | 252 | WP_001372275.1 | hypothetical protein | - |
| NLZ06_RS22680 (68406) | 68406..68966 | - | 561 | WP_001610319.1 | fertility inhibition protein FinO | - |
| NLZ06_RS22685 (69069) | 69069..69929 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| NLZ06_RS22690 (69988) | 69988..70734 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| NLZ06_RS22695 (70754) | 70754..76024 | - | 5271 | WP_001610320.1 | Multifunctional conjugation protein TraI | Relaxase |
| NLZ06_RS22700 (76024) | 76024..78258 | - | 2235 | WP_032316743.1 | type IV conjugative transfer system coupling protein TraD | - |
| NLZ06_RS22705 (78511) | 78511..79221 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NLZ06_RS22710 (79291) | 79291..79776 | - | 486 | WP_000605866.1 | hypothetical protein | - |
| NLZ06_RS22715 (79792) | 79792..82614 | - | 2823 | WP_001610322.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NLZ06_RS22720 (82611) | 82611..83984 | - | 1374 | WP_113444820.1 | conjugal transfer pilus assembly protein TraH | - |
| NLZ06_RS22725 (83971) | 83971..84363 | - | 393 | WP_047402297.1 | F-type conjugal transfer protein TrbF | - |
| NLZ06_RS22730 (84317) | 84317..84631 | - | 315 | WP_023149603.1 | P-type conjugative transfer protein TrbJ | - |
| NLZ06_RS22735 (84621) | 84621..85175 | - | 555 | WP_047402299.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NLZ06_RS22740 (85162) | 85162..85446 | - | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NLZ06_RS22745 (85527) | 85527..85862 | + | 336 | WP_000415571.1 | hypothetical protein | - |
| NLZ06_RS22750 (85843) | 85843..86184 | - | 342 | WP_047402303.1 | conjugal transfer protein TrbA | - |
| NLZ06_RS22755 (86198) | 86198..86941 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NLZ06_RS22760 (86934) | 86934..87191 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| NLZ06_RS22765 (87218) | 87218..89026 | - | 1809 | WP_047402305.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NLZ06_RS22770 (89023) | 89023..89661 | - | 639 | WP_042047200.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NLZ06_RS22775 (89670) | 89670..90662 | - | 993 | WP_042047198.1 | conjugal transfer pilus assembly protein TraU | - |
| NLZ06_RS22780 (90659) | 90659..91291 | - | 633 | WP_042047196.1 | type-F conjugative transfer system protein TraW | - |
| NLZ06_RS22785 (91288) | 91288..91674 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| NLZ06_RS22790 (91671) | 91671..94298 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| NLZ06_RS22795 (94458) | 94458..94679 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| NLZ06_RS22800 (94814) | 94814..95329 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NLZ06_RS22805 (95326) | 95326..95646 | - | 321 | WP_001057283.1 | conjugal transfer protein TrbD | - |
| NLZ06_RS22810 (95633) | 95633..96220 | - | 588 | WP_000002772.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NLZ06_RS22815 (96210) | 96210..97637 | - | 1428 | WP_047402310.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NLZ06_RS22820 (97637) | 97637..98365 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NLZ06_RS22825 (98352) | 98352..98918 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NLZ06_RS22830 (98940) | 98940..99251 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NLZ06_RS22835 (99256) | 99256..99618 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| NLZ06_RS22840 (99651) | 99651..100052 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| NLZ06_RS22845 (100145) | 100145..100834 | - | 690 | WP_047402313.1 | conjugal transfer transcriptional regulator TraJ | - |
| NLZ06_RS22850 (101021) | 101021..101404 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NLZ06_RS22855 (101725) | 101725..102327 | + | 603 | WP_254521281.1 | hypothetical protein | VF |
| NLZ06_RS22860 (102624) | 102624..103445 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NLZ06_RS22865 (103564) | 103564..103851 | - | 288 | WP_000107548.1 | hypothetical protein | - |
| NLZ06_RS22870 (104102) | 104102..105106 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| NLZ06_RS22875 (105200) | 105200..105460 | - | 261 | WP_254521282.1 | single-stranded DNA-binding protein | - |
| NLZ06_RS22880 (105530) | 105530..105703 | + | 174 | Protein_107 | hypothetical protein | - |
| NLZ06_RS22885 (105701) | 105701..105931 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| NLZ06_RS22890 (106151) | 106151..106276 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NLZ06_RS22895 (106218) | 106218..106367 | - | 150 | Protein_110 | plasmid maintenance protein Mok | - |
| - (106355) | 106355..106420 | - | 66 | NuclAT_1 | - | - |
| - (106353) | 106353..106577 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (106353) | 106353..106577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (106353) | 106353..106577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (106353) | 106353..106577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (106353) | 106353..106577 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| NLZ06_RS22900 (106389) | 106389..106577 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NLZ06_RS22905 (106546) | 106546..107308 | - | 763 | Protein_112 | plasmid SOS inhibition protein A | - |
| NLZ06_RS22910 (107305) | 107305..107739 | - | 435 | WP_137433372.1 | conjugation system SOS inhibitor PsiB | - |
| NLZ06_RS22915 (107794) | 107794..109752 | - | 1959 | WP_112025190.1 | ParB/RepB/Spo0J family partition protein | - |
| NLZ06_RS22920 (109811) | 109811..110044 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| NLZ06_RS22925 (110100) | 110100..110627 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| NLZ06_RS22930 (110879) | 110879..111883 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| NLZ06_RS22935 (112475) | 112475..112729 | - | 255 | WP_072163210.1 | hypothetical protein | - |
| NLZ06_RS22940 (112645) | 112645..112881 | - | 237 | WP_077816166.1 | hypothetical protein | - |
| NLZ06_RS22945 (112881) | 112881..113444 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| NLZ06_RS22950 (113490) | 113490..114851 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| NLZ06_RS22955 (114903) | 114903..115133 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NLZ06_RS22960 (115650) | 115650..115903 | + | 254 | Protein_123 | hypothetical protein | - |
| NLZ06_RS22965 (116127) | 116127..116309 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| NLZ06_RS22970 (116309) | 116309..116770 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| NLZ06_RS22975 (116770) | 116770..117195 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| NLZ06_RS22980 (117597) | 117597..118568 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| NLZ06_RS22985 (118829) | 118829..119041 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| NLZ06_RS22990 (119054) | 119054..119629 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| NLZ06_RS22995 (119698) | 119698..120045 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| NLZ06_RS23000 (120042) | 120042..120211 | - | 170 | Protein_131 | hypothetical protein | - |
| NLZ06_RS23005 (121235) | 121235..122206 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NLZ06_RS23010 (122206) | 122206..123372 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| NLZ06_RS23020 (124704) | 124704..126206 | - | 1503 | WP_254521283.1 | hypothetical protein | - |
| NLZ06_RS23030 (127187) | 127187..127345 | - | 159 | Protein_137 | fluoride efflux transporter CrcB | - |
| NLZ06_RS23035 (127686) | 127686..128099 | - | 414 | Protein_138 | phosphopyruvate hydratase | - |
| NLZ06_RS23040 (128097) | 128097..128354 | + | 258 | Protein_139 | transposase | - |
| NLZ06_RS23045 (128588) | 128588..129445 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ06_RS23050 (129442) | 129442..130299 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ06_RS23055 (130296) | 130296..131123 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| NLZ06_RS23060 (131123) | 131123..132037 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| NLZ06_RS23065 (132394) | 132394..133091 | + | 698 | WP_224158172.1 | IS1-like element IS1A family transposase | - |
| NLZ06_RS23070 (133271) | 133271..133784 | - | 514 | Protein_145 | DUF4113 domain-containing protein | - |
| NLZ06_RS23075 (133845) | 133845..133949 | - | 105 | Protein_146 | AAA family ATPase | - |
| NLZ06_RS23080 (133951) | 133951..134274 | - | 324 | Protein_147 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|