MGE detailed information
MGE type: Mobilizable plasmid MGE length: 67280 bp
Accession: NZ_CP100533 Location: 1..67280 Organism: Escherichia coli strain LH10-b-1 Replicon: plasmid pLH10-b-1-C
Accession: NZ_CP100533 Location: 1..67280 Organism: Escherichia coli strain LH10-b-1 Replicon: plasmid pLH10-b-1-C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ08_RS25665 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NLZ08_RS25670 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| NLZ08_RS25675 (2124) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| NLZ08_RS25680 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| NLZ08_RS25685 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| NLZ08_RS25690 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| NLZ08_RS25695 (6256) | 6256..6645 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| NLZ08_RS25700 (7449) | 7449..7628 | - | 180 | Protein_7 | transposase | - |
| NLZ08_RS25705 (7767) | 7767..8980 | + | 1214 | WP_162843585.1 | IS3 family transposase IS629 | Transposase |
| NLZ08_RS25710 (9128) | 9128..9396 | - | 269 | Protein_9 | integrase core domain-containing protein | - |
| NLZ08_RS25715 (9453) | 9453..10150 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| NLZ08_RS25720 (10167) | 10167..10322 | - | 156 | Protein_11 | colicin V | - |
| NLZ08_RS25725 (10300) | 10300..10536 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| NLZ08_RS25730 (11078) | 11078..11281 | - | 204 | Protein_13 | hypothetical protein | - |
| NLZ08_RS25735 (11454) | 11454..11621 | + | 168 | Protein_14 | colicin-B | - |
| NLZ08_RS25740 (11639) | 11639..12166 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| NLZ08_RS25745 (12410) | 12410..13225 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| NLZ08_RS25750 (13275) | 13275..13628 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NLZ08_RS25755 (13806) | 13806..14597 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| NLZ08_RS25760 (14594) | 14594..15283 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| NLZ08_RS25765 (15327) | 15327..15677 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| NLZ08_RS25770 (16210) | 16210..17136 | + | 927 | WP_080077783.1 | hypothetical protein | - |
| NLZ08_RS25775 (17186) | 17186..17440 | + | 255 | WP_059291112.1 | hypothetical protein | - |
| NLZ08_RS25780 (17938) | 17938..18282 | + | 345 | WP_087601730.1 | abortive infection protein | - |
| NLZ08_RS25785 (18456) | 18456..19457 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| NLZ08_RS25790 (19808) | 19808..20065 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| NLZ08_RS25795 (20065) | 20065..20655 | + | 591 | WP_000194553.1 | hypothetical protein | - |
| NLZ08_RS25800 (20675) | 20675..21022 | - | 348 | WP_024148462.1 | DUF6404 family protein | - |
| NLZ08_RS25805 (21107) | 21107..21385 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NLZ08_RS25810 (21385) | 21385..21654 | - | 270 | WP_042021804.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NLZ08_RS25815 (22047) | 22047..23057 | + | 1011 | WP_096984501.1 | IS110 family transposase IS1663 | Transposase |
| NLZ08_RS25820 (24047) | 24047..24904 | - | 858 | WP_001697864.1 | incFII family plasmid replication initiator RepA | - |
| NLZ08_RS25825 (24923) | 24923..25103 | - | 181 | Protein_32 | protein CopA/IncA | - |
| NLZ08_RS25830 (25207) | 25207..25464 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NLZ08_RS25835 (25704) | 25704..26294 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NLZ08_RS25840 (26332) | 26332..26541 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NLZ08_RS25845 (26587) | 26587..27048 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NLZ08_RS25850 (27293) | 27293..27505 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NLZ08_RS25855 (27634) | 27634..28194 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| NLZ08_RS25860 (28297) | 28297..29157 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| NLZ08_RS25865 (29216) | 29216..29962 | - | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NLZ08_RS25870 (29982) | 29982..32891 | - | 2910 | WP_254547658.1 | Multifunctional conjugation protein TraI | Relaxase |
| NLZ08_RS25875 (32902) | 32902..33153 | - | 252 | Protein_42 | conjugal transfer protein TraB | - |
| NLZ08_RS25880 (33153) | 33153..33881 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NLZ08_RS25885 (33868) | 33868..34434 | - | 567 | WP_011251373.1 | type IV conjugative transfer system protein TraE | - |
| NLZ08_RS25890 (34456) | 34456..34767 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NLZ08_RS25895 (34782) | 34782..35141 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NLZ08_RS25900 (35175) | 35175..35402 | - | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NLZ08_RS25905 (35496) | 35496..36182 | - | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NLZ08_RS25910 (36373) | 36373..36756 | - | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NLZ08_RS25915 (37033) | 37033..37680 | + | 648 | WP_000615259.1 | hypothetical protein | VF |
| NLZ08_RS25920 (37977) | 37977..38798 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NLZ08_RS25925 (38920) | 38920..39207 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NLZ08_RS25930 (39232) | 39232..39438 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NLZ08_RS25935 (39508) | 39508..39681 | + | 174 | Protein_54 | hypothetical protein | - |
| NLZ08_RS25940 (39679) | 39679..39909 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| NLZ08_RS25945 (40128) | 40128..40253 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NLZ08_RS25950 (40195) | 40195..40344 | - | 150 | Protein_57 | plasmid maintenance protein Mok | - |
| - (40332) | 40332..40397 | - | 66 | NuclAT_1 | - | - |
| - (40330) | 40330..40554 | + | 225 | NuclAT_0 | - | - |
| - (40330) | 40330..40554 | - | 225 | NuclAT_0 | - | - |
| - (40330) | 40330..40554 | - | 225 | NuclAT_0 | - | - |
| - (40330) | 40330..40554 | - | 225 | NuclAT_0 | - | - |
| - (40330) | 40330..40554 | - | 225 | NuclAT_0 | - | - |
| NLZ08_RS25955 (40366) | 40366..40554 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NLZ08_RS25960 (40523) | 40523..41285 | - | 763 | Protein_59 | plasmid SOS inhibition protein A | - |
| NLZ08_RS25965 (41282) | 41282..41716 | - | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NLZ08_RS25970 (41771) | 41771..43729 | - | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NLZ08_RS25975 (43794) | 43794..44027 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| NLZ08_RS25980 (44089) | 44089..44628 | - | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NLZ08_RS25985 (44826) | 44826..45053 | - | 228 | WP_071594011.1 | hypothetical protein | - |
| NLZ08_RS25990 (45205) | 45205..45768 | - | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NLZ08_RS25995 (45816) | 45816..47177 | - | 1362 | WP_075660697.1 | DUF3560 domain-containing protein | - |
| NLZ08_RS26000 (47229) | 47229..47459 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NLZ08_RS26005 (47976) | 47976..48224 | + | 249 | WP_075660698.1 | hypothetical protein | - |
| NLZ08_RS26010 (48497) | 48497..48688 | - | 192 | WP_001027519.1 | hypothetical protein | - |
| NLZ08_RS26015 (48685) | 48685..49107 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NLZ08_RS26020 (49154) | 49154..49579 | - | 426 | WP_250664168.1 | antirestriction protein | - |
| NLZ08_RS26025 (49981) | 49981..50952 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| NLZ08_RS26035 (51753) | 51753..52088 | - | 336 | WP_000343070.1 | hypothetical protein | - |
| NLZ08_RS26040 (52157) | 52157..52504 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| NLZ08_RS26045 (52501) | 52501..52670 | - | 170 | Protein_76 | hypothetical protein | - |
| NLZ08_RS26050 (53092) | 53092..54063 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NLZ08_RS26055 (54063) | 54063..55229 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| NLZ08_RS26065 (56382) | 56382..57884 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| NLZ08_RS26070 (58520) | 58520..58945 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| NLZ08_RS26075 (59087) | 59087..59566 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| NLZ08_RS26080 (60006) | 60006..60257 | + | 252 | WP_000163248.1 | hypothetical protein | - |
| NLZ08_RS26085 (60230) | 60230..60361 | - | 132 | Protein_84 | phosphopyruvate hydratase | - |
| NLZ08_RS26090 (60359) | 60359..60616 | + | 258 | Protein_85 | transposase | - |
| NLZ08_RS26095 (60850) | 60850..61707 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ08_RS26100 (61704) | 61704..62561 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ08_RS26105 (62558) | 62558..63385 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| NLZ08_RS26110 (63385) | 63385..64299 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| NLZ08_RS26115 (64655) | 64655..65352 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| NLZ08_RS26120 (65532) | 65532..66045 | - | 514 | Protein_91 | DUF4113 domain-containing protein | - |
| NLZ08_RS26125 (66106) | 66106..66210 | - | 105 | Protein_92 | AAA family ATPase | - |
| NLZ08_RS26130 (66212) | 66212..66535 | - | 324 | Protein_93 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|