MGE detailed information
MGE type: IScluster/Tn MGE length: 16539 bp
Accession: NZ_CP100501 Location: 30364..46902 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-A
Accession: NZ_CP100501 Location: 30364..46902 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ13_RS27160 (NLZ13_27165) | 25611..26567 | + | 957 | WP_062894335.1 | carbamate kinase | - |
| NLZ13_RS27165 (NLZ13_27170) | 26584..26973 | + | 390 | WP_254539435.1 | glutamyl-tRNA amidotransferase | - |
| NLZ13_RS27170 (NLZ13_27175) | 26999..28222 | + | 1224 | WP_254539436.1 | cytosine permease | - |
| NLZ13_RS27175 (NLZ13_27180) | 28300..28992 | + | 693 | WP_254539437.1 | LysR family transcriptional regulator | - |
| NLZ13_RS27180 (NLZ13_27185) | 28977..29189 | + | 213 | WP_249941578.1 | hypothetical protein | - |
| NLZ13_RS27185 (NLZ13_27190) | 29623..30012 | + | 390 | WP_062894334.1 | cytochrome b562 | - |
| NLZ13_RS27190 (NLZ13_27195) | 30373..30753 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27195 (NLZ13_27200) | 30750..31097 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27200 (NLZ13_27205) | 31147..32685 | + | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27205 (NLZ13_27210) | 32711..33942 | + | 1232 | WP_254539439.1 | IS3 family transposase IS2 | Transposase |
| NLZ13_RS27210 (NLZ13_27215) | 34207..37704 | + | 3498 | WP_001038844.1 | hypothetical protein | VF |
| NLZ13_RS27215 (NLZ13_27220) | 37851..39044 | + | 1194 | Protein_38 | IS3 family transposase IS629 | Transposase |
| NLZ13_RS27220 (NLZ13_27225) | 39137..40324 | - | 1188 | WP_160348040.1 | MFS transporter | - |
| NLZ13_RS27225 (NLZ13_27230) | 40381..41062 | - | 682 | Protein_40 | Petrobactin import ATP-binding protein FpuD | VF |
| NLZ13_RS27230 (NLZ13_27235) | 41062..42099 | - | 1038 | WP_000110580.1 | Hemin transport system permease protein HmuU | VF |
| NLZ13_RS27235 (NLZ13_27240) | 42099..43097 | - | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| NLZ13_RS27240 (NLZ13_27245) | 43247..43405 | - | 159 | Protein_43 | integrase core domain-containing protein | - |
| NLZ13_RS27245 (NLZ13_27250) | 43452..44042 | - | 591 | WP_000086535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NLZ13_RS27250 (NLZ13_27255) | 44543..44827 | + | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NLZ13_RS27255 (NLZ13_27260) | 44827..45102 | + | 276 | WP_000421266.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NLZ13_RS27260 (NLZ13_27265) | 45208..45447 | + | 240 | WP_001105068.1 | hypothetical protein | - |
| NLZ13_RS27265 (NLZ13_27270) | 45610..46782 | - | 1173 | WP_062893848.1 | IS91 family transposase ISSbo1 | Transposase |
| NLZ13_RS27270 (NLZ13_27275) | 47140..49234 | + | 2095 | Protein_49 | AAA family ATPase | - |
| NLZ13_RS27275 (NLZ13_27280) | 49396..49812 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NLZ13_RS27280 (NLZ13_27285) | 49809..50039 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NLZ13_RS27285 (NLZ13_27290) | 50599..51012 | + | 414 | WP_062893835.1 | hypothetical protein | - |
| NLZ13_RS27290 (NLZ13_27295) | 51014..51799 | + | 786 | WP_062893836.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|